RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 DNAJC5GQ8N7S2 189 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 AMER3Q8N944 861 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 OR4D11Q8NGI4 311 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 APOBEC4Q8WW27 367 aaKnown RBP8.31□□□□□ -1.08
FN1-227ENST00000498719 RSPRY1Q96DX4 576 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 TMEM19Q96HH6 336 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 MGLLQ99685 303 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 RTN4RQ9BZR6 473 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 DNAJC27Q9NZQ0 273 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 TRPC4Q9UBN4 977 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 CLEC2DQ9UHP7 191 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 ANGPT4Q9Y264 503 aa8.31□□□□□ -1.08
FN1-227ENST00000498719 PRSS29PA6NIE9 313 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 DHHO43323 396 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SSX4O60224 188 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 CNOT3O75175 753 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 ENTPD6O75354 484 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 OR5F1O95221 314 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 KRT75O95678 551 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 FGBP02675 491 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 LCATP04180 440 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 AMY1AP04745 511 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 THBS1P07996 1170 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 ALOX5P09917 674 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 ADH5P11766 374 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 UQCRC2P22695 453 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SOX3P41225 446 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 FNTBP49356 437 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TMED10P49755 219 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 MAPK12P53778 367 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TPTEP56180 551 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 RUNX2Q13950 521 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 LARS2Q15031 903 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 SSX1Q16384 188 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 GPAT3Q53EU6 434 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TCTN3Q6NUS6 607 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 DEF8Q6ZN54 512 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 NCCRP1Q6ZVX7 275 aaPredicted RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 WDR36Q8NI36 951 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 EXOSC8Q96B26 276 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 PDXPQ96GD0 296 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 LMF1Q96S06 567 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 KCNS3Q9BQ31 491 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SF3B5Q9BWJ5 86 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 NLNQ9BYT8 704 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 OR52A5Q9H2C5 316 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 EPHX3Q9H6B9 360 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TEX10Q9NXF1 929 aaPredicted RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 ERVK-19Q9WJR5 959 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TRIOO75962 3097 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SPEGQ15772 3267 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SH2D7A6NKC9 451 aaPredicted RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 C5orf58C9J3I9 102 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 WWP2O00308 870 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SMAD9O15198 467 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 PI15O43692 258 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 PRKRAO75569 313 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 CER1O95813 267 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 ADRB3P13945 408 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TGM4P49221 684 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 UGT2B15P54855 530 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 RNF4P78317 190 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SELENBP1Q13228 472 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 SRSF5Q13243 272 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 LRRC26Q2I0M4 334 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 C9orf64Q5T6V5 341 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 UTS2BQ765I0 119 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 MINDY2Q8NBR6 621 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 STEAP2Q8NFT2 490 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 OR5D16Q8NGK9 328 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 OR2L2Q8NH16 312 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 DNAJA4Q8WW22 397 aaPredicted RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 TM4SF18Q96CE8 201 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 LRIG1Q96JA1 1093 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 PRAP1Q96NZ9 151 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 TREM1Q9NP99 234 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 LHX9Q9NQ69 397 aa8.3□□□□□ -1.08
FN1-227ENST00000498719 RBMX2Q9Y388 322 aaKnown RBP8.3□□□□□ -1.08
FN1-227ENST00000498719 LOC102723996A0A087X1L8 192 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 FAM171A2A8MVW0 826 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ANHXE9PGG2 379 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 H3BN98 237 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 PSMD11O00231 422 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 RFXAPO00287 272 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 LATO43561 262 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 TMPRSS11DO60235 418 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 OR10H3O60404 316 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 GPX5O75715 221 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 IFNA14P01570 189 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 SRPRAP08240 638 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 CD72P21854 359 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 SERPINB1P30740 379 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 RPL3P39023 403 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 EIF4HQ15056 248 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 SYPL1Q16563 259 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 KHDRBS2Q5VWX1 349 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms