RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ANP32BQ92688 251 aaKnown RBP2.2□□□□□ -2.06
RIF1-212ENST00000498041 CCDC51Q96ER9 411 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 CDHR1Q96JP9 859 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 C9orf72Q96LT7 481 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 ZIM3Q96PE6 472 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 KLF6Q99612 283 aaPredicted RBP2.2□□□□□ -2.06
RIF1-212ENST00000498041 MED10Q9BTT4 135 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 SNRNP25Q9BV90 132 aaKnown RBP2.2□□□□□ -2.06
RIF1-212ENST00000498041 PLA2G2FQ9BZM2 168 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 LINC00597Q9H2U6 94 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 LIME1Q9H400 295 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 COPS7BQ9H9Q2 264 aaPredicted RBP2.2□□□□□ -2.06
RIF1-212ENST00000498041 RGS18Q9NS28 235 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 PIGVQ9NUD9 493 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 CLEC5AQ9NY25 188 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 PLEK2Q9NYT0 353 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 ZNF346Q9UL40 294 aaKnown RBP2.2□□□□□ -2.06
RIF1-212ENST00000498041 DNPEPQ9ULA0 475 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 EXOC7Q9UPT5 735 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 SAR1BQ9Y6B6 198 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 COL1A2P08123 1366 aa2.2□□□□□ -2.06
RIF1-212ENST00000498041 UBE4BO95155 1302 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ANKRD12Q6UB98 2062 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SCN2AQ99250 2005 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 TEX48A0A1B0GUV7 120 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 C13orf42A0A1B0GVH6 325 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ATP6AP2A0A1C7CYW4 349 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 OR51F1A6NGY5 319 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SIGLEC16A6NMB1 481 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ZNF724A8MTY0 619 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 A8MX80 341 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 GOLGA8KD6RF30 607 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 H0YIG0 161 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 GOLGA8TH3BQL2 631 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 K7ERQ8 282 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SLC33A1O00400 549 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 MAPK13O15264 365 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ZSCAN12O43309 604 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CST8O60676 142 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 NME6O75414 186 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 PROSCO94903 275 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 OR6A2O95222 327 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 PRAMEF12O95522 483 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 FGFR1OPO95684 399 aaKnown RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 PDGFBP01127 241 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 FHP07954 510 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 PIRTP0C851 137 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 VDRP11473 427 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 KCNE1P15382 129 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ATF6P18850 670 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 OAS2P29728 719 aaKnown RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 OR1D2P34982 312 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CA8P35219 290 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 COILP38432 576 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 MATKP42679 507 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CDKN2BP42772 138 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 RGRP47804 291 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SULT1E1P49888 294 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 METAP1P53582 386 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 GPX6P59796 221 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 MAXP61244 160 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 OTUD4Q01804 1114 aaKnown RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 ROR1Q01973 937 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 MFGE8Q08431 387 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 PLD1Q13393 1074 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 DPYSL3Q14195 570 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 MXD4Q14582 209 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 SPA17Q15506 151 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SPHARQ15513 63 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 TYSND1Q2T9J0 566 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 KBTBD12Q3ZCT8 623 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 NHLRC3Q5JS37 347 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ARMC3Q5W041 872 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 LIPJQ5W064 366 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 REP15Q6BDI9 236 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CAPN13Q6MZZ7 669 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 LINC00696Q6ZRV3 163 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 OTOAQ7RTW8 1153 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 TAC4Q86UU9 113 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 C17orf64Q86WR6 236 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ZNF584Q8IVC4 421 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CCDC170Q8IYT3 715 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 THEM5Q8N1Q8 247 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SAMD12Q8N8I0 201 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CCDC197Q8NCU1 140 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 MSANTD4Q8NCY6 345 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ZNRF1Q8ND25 227 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ANKRD20A12PQ8NF67 263 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ACTL9Q8TC94 416 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 AENQ8WTP8 325 aaKnown RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 FAM172AQ8WUF8 416 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ING5Q8WYH8 240 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 PRCCQ92733 491 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 GGHQ92820 318 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 MAGOHBQ96A72 148 aaKnown RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 ULK4Q96C45 1275 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 ANKRD36BP1Q96IX9 119 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 SSX3Q99909 188 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 TMEM121Q9BTD3 319 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CCDC94Q9BW85 323 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms