RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GMPPAQ96IJ6 420 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-213ENST00000496347 MRGPRX4Q96LA9 322 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 KLHL15Q96M94 604 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 SLC39A3Q9BRY0 314 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 TMEM185BQ9H7F4 350 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 POLE3Q9NRF9 147 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 GLRX2Q9NS18 164 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ELOVL5Q9NYP7 299 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 NDRG3Q9UGV2 375 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 BTNL2Q9UIR0 455 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ST6GALNAC2Q9UJ37 374 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-213ENST00000496347 TNFSF11O14788 317 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF264O43296 627 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 EIF4E2O60573 245 aaKnown RBP14.1□□□□□ -0.15
HDAC4-213ENST00000496347 SS18L1O75177 396 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-213ENST00000496347 SYNGR4O95473 234 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 PLGP00747 810 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-213ENST00000496347 CCKARP32238 428 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 S100A3P33764 101 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 HPCAP84074 193 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 SELENBP1Q13228 472 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 CBFBQ13951 182 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF141Q15928 474 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 ARHGAP11BQ3KRB8 267 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 PDZK1Q5T2W1 519 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 SAXO2Q658L1 398 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 HBMQ6B0K9 141 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 CBLN3Q6UW01 205 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 PAMR1Q6UXH9 720 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 TMCO5AQ8N6Q1 288 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 TRIML2Q8N7C3 387 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 GLB1L3Q8NCI6 653 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-213ENST00000496347 OR6K3Q8NGY3 331 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 OR5W2Q8NH69 310 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 LINC01560Q8TB33 94 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 POC1BQ8TC44 478 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 NRGNQ92686 78 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 ARSGQ96EG1 525 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 NPAS1Q99742 590 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 SLC35A5Q9BS91 424 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 PRRG4Q9BZD6 226 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 OR51I1Q9H343 314 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 MARCOQ9UEW3 520 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-213ENST00000496347 PROCRQ9UNN8 238 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 CARD8Q9Y2G2 431 aa14.1□□□□□ -0.15
HDAC4-213ENST00000496347 UQCRHLA0A096LP55 91 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 SERINC4A6NH21 518 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 GTPBP1O00178 669 aaKnown RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 KLF11O14901 512 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 OIP5O43482 229 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 NTN1O95631 604 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 CGAP01215 116 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 PABPC4LP0CB38 370 aaKnown RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 IDO1P14902 403 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 PRKCAP17252 672 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 CHI3L1P36222 383 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 UGT2B10P36537 528 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 SLC6A8P48029 635 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 ART1P52961 327 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 PHC1P78364 1004 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 SKP2Q13309 424 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF239Q16600 458 aaKnown RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 PPP4R4Q6NUP7 873 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF474Q6S9Z5 364 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 CLEC4FQ8N1N0 589 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 GPR119Q8TDV5 335 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 CPNE4Q96A23 557 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 ZBTB9Q96C00 473 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 ZBTB18Q99592 522 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 FOXC2Q99958 501 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 KLHDC3Q9BQ90 382 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 OPN3Q9H1Y3 402 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 TMBIM4Q9HC24 238 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 TIGARQ9NQ88 270 aa14.09□□□□□ -0.15
HDAC4-213ENST00000496347 SETD2Q9BYW2 2564 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-213ENST00000496347 A0A0J9YW62 118 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 CXCL13O43927 109 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 DNAJA2O60884 412 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 HRGP04196 525 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 PGRP06401 933 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 POU2F1P14859 743 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 EPHA3P29320 983 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 SFTPDP35247 375 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 ANXA11P50995 505 aaKnown RBP14.08□□□□□ -0.16
HDAC4-213ENST00000496347 CCR4P51679 360 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 IST1P53990 364 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 CTBP2P56545 445 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 GPR68Q15743 365 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 NDUFAF6Q330K2 333 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 SLC25A53Q5H9E4 307 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 AP1ARQ63HQ0 302 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 C3orf33Q6P1S2 294 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 TNFAIP8L2Q6P589 184 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-213ENST00000496347 EIF3MQ7L2H7 374 aaKnown RBP14.08□□□□□ -0.16
HDAC4-213ENST00000496347 FAM71CQ8NEG0 241 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 RNF128Q8TEB7 428 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 ZFP90Q8TF47 636 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 ST8SIA1Q92185 356 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms