RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 C12orf71A8MTZ7 269 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 I3L1I5 382 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 J3QRE1 110 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 CLDN4O14493 209 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 LALBAP00709 142 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 RBM34P42696 430 aaKnown RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 TMED10P49755 219 aaKnown RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 RNF144AP50876 292 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 TPTEP56180 551 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SCN1BQ07699 218 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 GPR50Q13585 617 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF79Q15937 498 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 PRTGQ2VWP7 1150 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF791Q3KP31 576 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SLC35F1Q5T1Q4 408 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF550Q7Z398 422 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF595Q8IYB9 648 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SLC43A2Q8N370 569 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ARHGEF39Q8N4T4 335 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 CAMKK1Q8N5S9 505 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 FAM181AQ8N9Y4 354 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ATP6V1C2Q8NEY4 427 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 OR4C6Q8NH72 309 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SLC35B4Q969S0 331 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 TCTN2Q96GX1 697 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 G6PC3Q9BUM1 346 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 LRRC61Q9BV99 259 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 RBCK1Q9BYM8 510 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 MUTYHQ9UIF7 546 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SLC9B1P1A6NJY1 282 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SHISA7A6NL88 538 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 RIIAD1A6NNX1 92 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 H3BQ06 376 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 GABRPO00591 440 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 CTNSO60931 367 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 IL7P13232 177 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SPNP16150 400 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF3P17036 446 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 FUT1P19526 365 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 S1PR1P21453 382 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 CFL1P23528 166 aaKnown RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 EMDP50402 254 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 PSMD4P55036 377 aaKnown RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 RPS7P62081 194 aaKnown RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 PPP3R1P63098 170 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ELOCQ15369 112 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 GLYR1Q49A26 553 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 KLHL12Q53G59 568 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ZMAT1Q5H9K5 638 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 DGAT2L6Q6ZPD8 337 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 RTL4Q6ZR62 310 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 Q6ZS52 159 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 GATAD2AQ86YP4 633 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 KLBQ86Z14 1044 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ARIH2OSQ8N7S6 290 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 LSMEM1Q8N8F7 131 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 GDPD1Q8N9F7 314 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SYT14Q8NB59 555 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 OR13C2Q8NGS9 318 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 NEIL3Q8TAT5 605 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 DNAJA4Q8WW22 397 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 CNOT9Q92600 299 aaKnown RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 KIAA1143Q96AT1 154 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-208ENST00000496116 PEX11GQ96HA9 241 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 DGAT2Q96PD7 388 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 GDF15Q99988 308 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 ALG8Q9BVK2 526 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 HDHD5Q9BXW7 423 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 KCNN2Q9H2S1 579 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 Q9N2J8 555 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 SACM1LQ9NTJ5 587 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 HCN3Q9P1Z3 774 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 TBC1D24Q9ULP9 559 aa10.24□□□□□ -0.77
CMSS1-208ENST00000496116 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 A0A1B0GWA3 101 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 DAPL1A0PJW8 107 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 LRRTM2O43300 516 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 PRAMEF2O60811 474 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 TMCC2O75069 709 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF217O75362 1048 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 AZGP1P25311 298 aaKnown RBP10.23□□□□□ -0.77
CMSS1-208ENST00000496116 NOS3P29474 1203 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 SLC16A1P53985 500 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 FAM53BQ14153 422 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 BAK1Q16611 211 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ALG10BQ5I7T1 473 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ZC3H14Q6PJT7 736 aaKnown RBP10.23□□□□□ -0.77
CMSS1-208ENST00000496116 SYT13Q7L8C5 426 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ZAR1Q86SH2 424 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 OAFQ86UD1 273 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 MARCH9Q86YJ5 346 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 SLC37A3Q8NCC5 494 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ITFG2Q969R8 447 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 VSTM2LQ96N03 204 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF578Q96N58 590 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-208ENST00000496116 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-208ENST00000496116 MIXL1Q9H2W2 232 aa10.23□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF576Q9H609 170 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms