RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 CCSER1Q9C0I3 900 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 WDR76Q9H967 626 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 TAS2R3Q9NYW6 316 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 ONECUT1Q9UBC0 465 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 RIMS3Q9UJD0 308 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 ANAPC7Q9UJX3 599 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 B9D1Q9UPM9 204 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 SMC3Q9UQE7 1217 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 WDR45Q9Y484 360 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 MAB21L2Q9Y586 359 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 ARID1AO14497 2285 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 ATP8B3O60423 1300 aa2.35□□□□□ -2.03
VPS50-219ENST00000495039 ARHGAP23Q9P227 1491 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 IGHV7-81A0A0B4J1V7 117 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 PPIAL4CA0A0B4J2A2 164 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.34□□□□□ -2.03
VPS50-219ENST00000495039 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.34□□□□□ -2.03
VPS50-219ENST00000495039 FAM231BA6NCW3 169 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 CLDN5O00501 218 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 EMC8O43402 210 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 LANCL1O43813 399 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 IGLV1-47P01700 117 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 OPN1LWP04000 364 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 PPIAL4GP0DN37 164 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 CALCBP10092 127 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 IGLL1P15814 213 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 EPHX2P34913 555 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 DLSTP36957 453 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 HTD2P86397 168 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 MECOMQ03112 1051 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 CFAP221Q4G0U5 840 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 OTPQ5XKR4 325 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 ASPHD2Q6ICH7 369 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 Q6P435 159 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 ZNF589Q86UQ0 364 aaPredicted RBP2.34□□□□□ -2.03
VPS50-219ENST00000495039 TMEM17Q86X19 198 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 C17orf82Q86X59 251 aaPredicted RBP2.34□□□□□ -2.03
VPS50-219ENST00000495039 BBS1Q8NFJ9 593 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 AENQ8WTP8 325 aaKnown RBP2.34□□□□□ -2.03
VPS50-219ENST00000495039 MS4A14Q96JA4 679 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 CITED1Q99966 193 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 NANSQ9NR45 359 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 XPO7Q9UIA9 1087 aaKnown RBP2.34□□□□□ -2.03
VPS50-219ENST00000495039 USP16Q9Y5T5 823 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 U3KQV3 271 aa2.34□□□□□ -2.03
VPS50-219ENST00000495039 LOC100131303A0A0U1RQF7 123 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 PINLYPA6NC86 204 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 TUBAL3A6NHL2 446 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 H3BMQ9 156 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 MAGEB4O15481 346 aaPredicted RBP2.33□□□□□ -2.04
VPS50-219ENST00000495039 B3GALNT1O75752 331 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 B3GAT3O94766 335 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 DIRAS3O95661 229 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 AK1P00568 194 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 IGF1P05019 195 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 GCFC2P16383 781 aaKnown RBP2.33□□□□□ -2.04
VPS50-219ENST00000495039 CALB2P22676 271 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 HTR2AP28223 471 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 BPIFB3P59826 476 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 RIPPLY1Q0D2K3 151 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 SLC10A7Q0GE19 358 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 LAGE3Q14657 143 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 SHHQ15465 462 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 CCDC92Q53HC0 331 aaPredicted RBP2.33□□□□□ -2.04
VPS50-219ENST00000495039 HSP90AA5PQ58FG0 334 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 EOGTQ5NDL2 527 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 ACSM5Q6NUN0 579 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 FAHD2BQ6P2I3 314 aaPredicted RBP2.33□□□□□ -2.04
VPS50-219ENST00000495039 AFTPHQ6ULP2 937 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 DPY19L4Q7Z388 723 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 LCA5Q86VQ0 697 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 CENPLQ8N0S6 344 aaPredicted RBP2.33□□□□□ -2.04
VPS50-219ENST00000495039 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 MTURNQ8N3F0 131 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 ALLCQ8N6M5 410 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 OR9A1PQ8NGU1 263 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 NANPQ8TBE9 248 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 RNF138Q8WVD3 245 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 FAHD2AQ96GK7 314 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 CYP2S1Q96SQ9 504 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 GPA33Q99795 319 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 DUSP16Q9BY84 665 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 DPH5Q9H2P9 285 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 POLE3Q9NRF9 147 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 CYTL1Q9NRR1 136 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 MARCH5Q9NX47 278 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 CD274Q9NZQ7 290 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 WRAP73Q9P2S5 460 aaPredicted RBP2.33□□□□□ -2.04
VPS50-219ENST00000495039 ZNF221Q9UK13 617 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 AURKCQ9UQB9 309 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 PLLPQ9Y342 182 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 KIF3AQ9Y496 699 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 MFHAS1Q9Y4C4 1052 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 OARD1Q9Y530 152 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 LRRK1Q38SD2 2015 aa2.33□□□□□ -2.04
VPS50-219ENST00000495039 IGHV1OR15-1A0A075B7D0 117 aa2.32□□□□□ -2.04
VPS50-219ENST00000495039 ESYT2A0FGR8 921 aa2.32□□□□□ -2.04
VPS50-219ENST00000495039 GSAPA4D1B5 854 aa2.32□□□□□ -2.04
VPS50-219ENST00000495039 RGSL1A5PLK6 1076 aa2.32□□□□□ -2.04
VPS50-219ENST00000495039 SULT2B1O00204 365 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms