RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PIWIL2Q8TC59 973 aaKnown RBP29.82■■■□□ 2.36
CBX4-203ENST00000494546 NRGNQ92686 78 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 ADGRG7Q96K78 797 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 MARK4Q96L34 752 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 ZNF350Q9GZX5 532 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 KCNE5Q9UJ90 142 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 SERINC4A6NH21 518 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 KLF11O14901 512 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 ZNF264O43296 627 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 CXCL13O43927 109 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 SFTPDP35247 375 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 SLC6A8P48029 635 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 CCR4P51679 360 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 TOMM34Q15785 309 aaPredicted RBP29.81■■■□□ 2.36
CBX4-203ENST00000494546 HEPHL1Q6MZM0 1159 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 ESPNLQ6ZVH7 1005 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 LILRA2Q8N149 483 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 OR2V1Q8NHB1 315 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 FBXO27Q8NI29 283 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 GPR119Q8TDV5 335 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 MAELQ96JY0 434 aaKnown RBP29.81■■■□□ 2.36
CBX4-203ENST00000494546 INPP5KQ9BT40 448 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 OPN3Q9H1Y3 402 aaPredicted RBP29.81■■■□□ 2.36
CBX4-203ENST00000494546 CLEC4MQ9H2X3 399 aaPredicted RBP29.81■■■□□ 2.36
CBX4-203ENST00000494546 RASSF1Q9NS23 344 aa29.81■■■□□ 2.36
CBX4-203ENST00000494546 PAQR5Q9NXK6 330 aaPredicted RBP29.81■■■□□ 2.36
CBX4-203ENST00000494546 MCTS1Q9ULC4 181 aaKnown RBP29.81■■■□□ 2.36
CBX4-203ENST00000494546 A0A0J9YW62 118 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 CENPVL1A0A0U1RR11 272 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 CCDC154A6NI56 674 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 ADAMDEC1O15204 470 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 SYNGR4O95473 234 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 IDO1P14902 403 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 ZNF141Q15928 474 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 PDSS1Q5T2R2 415 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 HBMQ6B0K9 141 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 TRIML2Q8N7C3 387 aa29.8■■■□□ 2.36
CBX4-203ENST00000494546 GPC6Q9Y625 555 aaPredicted RBP29.8■■■□□ 2.36
CBX4-203ENST00000494546 ANKHD1Q8IWZ3 2542 aaKnown RBP29.8■■■□□ 2.36
CBX4-203ENST00000494546 EIF4E2O60573 245 aaKnown RBP29.79■■■□□ 2.36
CBX4-203ENST00000494546 UGT2B17O75795 530 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 CYP7B1O75881 506 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 C1QCP02747 245 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 DAZAP2Q15038 168 aaPredicted RBP29.79■■■□□ 2.36
CBX4-203ENST00000494546 PDCD4Q53EL6 469 aaKnown RBP29.79■■■□□ 2.36
CBX4-203ENST00000494546 ZNF621Q6ZSS3 439 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 RNF130Q86XS8 419 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 GLB1L3Q8NCI6 653 aaPredicted RBP29.79■■■□□ 2.36
CBX4-203ENST00000494546 TOR1AIP2Q8NFQ8 470 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 OR5W2Q8NH69 310 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 ROPN1LQ96C74 230 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 ATP6V1G3Q96LB4 118 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 KLHL15Q96M94 604 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 OR52B2Q96RD2 323 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 WDR45Q9Y484 360 aa29.79■■■□□ 2.36
CBX4-203ENST00000494546 FAM221AA4D161 298 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 DIAPH2O60879 1101 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 PLGP00747 810 aaPredicted RBP29.78■■■□□ 2.36
CBX4-203ENST00000494546 GSNP06396 782 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 ELK4P28324 431 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 ADH6P28332 368 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 SHC1P29353 583 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 CDKN2CP42773 168 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 FGFBP1Q14512 234 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 FBXW10Q5XX13 1052 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 CLEC4AQ9UMR7 237 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 OTOGQ6ZRI0 2925 aa29.78■■■□□ 2.36
CBX4-203ENST00000494546 UQCRHLA0A096LP55 91 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 ZNF195O14628 629 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 EFNA2O43921 213 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 SLC22A3O75751 556 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 PRKCAP17252 672 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 FAM27E3Q08E93 113 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 LRRC74AQ0VAA2 488 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 FUT5Q11128 374 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 CBFBQ13951 182 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 GPAT3Q53EU6 434 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 TYW3Q6IPR3 259 aaKnown RBP29.77■■■□□ 2.36
CBX4-203ENST00000494546 ZNF474Q6S9Z5 364 aaPredicted RBP29.77■■■□□ 2.36
CBX4-203ENST00000494546 FAM214BQ7L5A3 538 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 ATP6V1C2Q8NEY4 427 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 OSTF1Q92882 214 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 LAT2Q9GZY6 243 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 PROCRQ9UNN8 238 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 USH1CQ9Y6N9 552 aa29.77■■■□□ 2.36
CBX4-203ENST00000494546 KIAA0513O60268 411 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 CSTAP01040 98 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 HPCAP84074 193 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 SKP2Q13309 424 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 QPRTQ15274 297 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 GUSBP1Q15486 140 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 MAPK14Q16539 360 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 TTMPQ5BVD1 217 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 ZNF524Q96C55 264 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 ARSGQ96EG1 525 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 MRGPRX4Q96LA9 322 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 THUMPD3Q9BV44 507 aaKnown RBP29.76■■■□□ 2.35
CBX4-203ENST00000494546 POLE3Q9NRF9 147 aa29.76■■■□□ 2.35
CBX4-203ENST00000494546 SH3D21A4FU49 640 aa29.75■■■□□ 2.35
CBX4-203ENST00000494546 HMGN4O00479 90 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms