RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SLC30A2Q9BRI3 323 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 SPATA9Q9BWV2 254 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 UCK2Q9BZX2 261 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TOR3AQ9H497 397 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 DUSP21Q9H596 190 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 CDCP1Q9H5V8 836 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 PELI2Q9HAT8 420 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 MMP25Q9NPA2 562 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 IFT46Q9NQC8 304 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 DNAJB9Q9UBS3 223 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TINAGQ9UJW2 476 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF223Q9UK11 482 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-234ENST00000493923 HIVEP1P15822 2718 aa7.55□□□□□ -1.2
HDAC6-234ENST00000493923 TRGV8A0A0C4DH27 118 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 NCF1BA6NI72 391 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GABRR3A8MPY1 467 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 NCF1CA8MVU1 366 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HNRNPCL2B2RXH8 293 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 G3V2T6 193 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 NME4O00746 187 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GNB5O14775 395 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 TSPAN4O14817 238 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GATCO43716 136 aaKnown RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 CLIC3O95833 236 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 ANGPTL1O95841 491 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 APOC1P02654 83 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HTR1AP08908 422 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HIST1H2AGP0C0S8 130 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 SLC35G6P0C7Q6 338 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 NCF1P14598 390 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 CD36P16671 472 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 IL7RP16871 459 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HIST1H2ADP20671 130 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 MYL9P24844 172 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 EVI2BP34910 448 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GGT5P36269 586 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 RFC3P40938 356 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 PIK3CBP42338 1070 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HAAOP46952 286 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 POLR2GP62487 172 aaKnown RBP eCLIP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 CD47Q08722 323 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 PWP1Q13610 501 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 KEAP1Q14145 624 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 EFR3AQ14156 821 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 SLBPQ14493 270 aaKnown RBP eCLIP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 IMPG1Q17R60 797 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 DPY19L1Q2PZI1 675 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HSD17B12Q53GQ0 312 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 FAM219BQ5XKK7 198 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 TMEM65Q6PI78 240 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF704Q6ZNC4 412 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 RRM2BQ7LG56 351 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GALNTL5Q7Z4T8 443 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GPAT4Q86UL3 456 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HIPK1Q86Z02 1210 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 KLHDC8AQ8IYD2 350 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 TAGAPQ8N103 731 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 EID3Q8N140 333 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 RNF175Q8N4F7 328 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 FAM83FQ8NEG4 500 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 THAP3Q8WTV1 239 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 RHBDF1Q96CC6 855 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 VPS39Q96JC1 886 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HIST1H2AHQ96KK5 128 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF354BQ96LW1 612 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 PTCHD1Q96NR3 888 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 OR1F2PQ96R84 312 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 HIST1H2AJQ99878 128 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 MRPL57Q9BQC6 102 aaKnown RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 H2AFJQ9BTM1 129 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 RACGAP1Q9H0H5 632 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 NTN4Q9HB63 628 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 PLSCR3Q9NRY6 295 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 SEC14L3Q9UDX4 400 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 C19orf25Q9UFG5 118 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 ELF5Q9UKW6 265 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF490Q9ULM2 529 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-234ENST00000493923 STUB1Q9UNE7 303 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 TMEM5Q9Y2B1 443 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 OARD1Q9Y530 152 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 MTORP42345 2549 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 FREM3P0C091 2139 aa7.54□□□□□ -1.2
HDAC6-234ENST00000493923 A0A087X1B8 175 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 A0A0G2JMM0 328 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 LOC100130705A0A1B0GUX0 176 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 A0A1W2PPB8 328 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 TCRBV16S1A1N1A0A5B0 115 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ASPDHA6ND91 283 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF98A6NK75 572 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 TMEM200CA6NKL6 621 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 PCP4L1A6NKN8 68 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 KIR3DP1A8MWS1 328 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 KRBOX1C9JBD0 128 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms