RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GDF7Q7Z4P5 450 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ARL14Q8N4G2 192 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CAMKK1Q8N5S9 505 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 PIGXQ8TBF5 258 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 TEX47Q8TBZ9 253 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 SLC41A3Q96GZ6 507 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 FAM46AQ96IP4 442 aaKnown RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 STACQ99469 402 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 RPH3AQ9Y2J0 694 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 PRUNE2Q8WUY3 3088 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 METTL12A8MUP2 240 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 THY1P04216 161 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 THBS1P07996 1170 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 NME1P15531 152 aaKnown RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 MAOBP27338 520 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 OMPP47874 163 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 RUNX1T1Q06455 604 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 UBXN2BQ14CS0 331 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 NCF4Q15080 339 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 MAPK14Q16539 360 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 DECR1Q16698 335 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 FAM209BQ5JX69 171 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ATAD3CQ5T2N8 411 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 C19orf48Q6RUI8 117 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ACOT11Q8WXI4 607 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 CTHRC1Q96CG8 243 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 LRR1Q96L50 414 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 FBXO34Q9NWN3 711 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 MALT1Q9UDY8 824 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 TMEM5Q9Y2B1 443 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 SPIN1Q9Y657 262 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 V9GYH0 126 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 A0A1W2PR77 199 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 YKT6O15498 198 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 RPS4Y1P22090 263 aaKnown RBP12.77□□□□□ -0.36
VCP-207ENST00000493886 ETV5P41161 510 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 FASLGP48023 281 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 ETV1P50549 477 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 TAGLNQ01995 201 aaKnown RBP12.77□□□□□ -0.36
VCP-207ENST00000493886 MAP4K2Q12851 820 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 FZD5Q13467 585 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 PRTGQ2VWP7 1150 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 ZNF517Q6ZMY9 492 aaPredicted RBP12.77□□□□□ -0.36
VCP-207ENST00000493886 RASSF6Q6ZTQ3 369 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 MAP3K3Q99759 626 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 SAP130Q9H0E3 1048 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 ABCB9Q9NP78 766 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 STMN3Q9NZ72 180 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 ZNF221Q9UK13 617 aa12.77□□□□□ -0.36
VCP-207ENST00000493886 IFI6P09912 130 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 SLC35E2P0CK97 266 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 MAP3K8P41279 467 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 RFX2P48378 723 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 ZNF136P52737 540 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 MRPS15P82914 257 aaKnown RBP12.77□□□□□ -0.37
VCP-207ENST00000493886 EFNB1P98172 346 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 SNAPC1Q16533 368 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 SYT14P1Q58G82 188 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 CLEC12AQ5QGZ9 265 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 SLC27A4Q6P1M0 643 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 GKN2Q86XP6 184 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 PHC2Q8IXK0 858 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 OR8D4Q8NGM9 314 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 MND1Q9BWT6 205 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 RBCK1Q9BYM8 510 aa12.77□□□□□ -0.37
VCP-207ENST00000493886 A0A0A6YYC8 382 aaPredicted RBP12.76□□□□□ -0.37
VCP-207ENST00000493886 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 I3L1I5 382 aaPredicted RBP12.76□□□□□ -0.37
VCP-207ENST00000493886 OR10H2O60403 315 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
VCP-207ENST00000493886 PROS1P07225 676 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 IL7P13232 177 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 GABRA3P34903 492 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 CD79BP40259 229 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 HTR3AP46098 478 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 CAPZBP47756 277 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 RORCP51449 518 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
VCP-207ENST00000493886 FIGNL1Q6PIW4 674 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 DGAT2L6Q6ZPD8 337 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 FGF11Q92914 225 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 TTYH2Q9BSA4 534 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 RACGAP1Q9H0H5 632 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 NARFLQ9H6Q4 476 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 STUB1Q9UNE7 303 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 PEX12O00623 359 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 POLR1CO15160 346 aaPredicted RBP12.76□□□□□ -0.37
VCP-207ENST00000493886 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
VCP-207ENST00000493886 CBX7O95931 251 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 CH25HO95992 272 aa12.76□□□□□ -0.37
VCP-207ENST00000493886 S100A6P06703 90 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms