RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 DSCR4P56555 118 aaPredicted RBP10.51□□□□□ -0.73
CTSA-209ENST00000493522 CDK6Q00534 326 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 SCARB2Q14108 478 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 MAPK14Q16539 360 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 RABL3Q5HYI8 236 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 RAET1LQ5VY80 246 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 NANOGP8Q6NSW7 305 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 EIF3MQ7L2H7 374 aaKnown RBP10.51□□□□□ -0.73
CTSA-209ENST00000493522 FGD2Q7Z6J4 655 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 CD163Q86VB7 1156 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 CHERPQ8IWX8 916 aaKnown RBP10.51□□□□□ -0.73
CTSA-209ENST00000493522 PEX5LQ8IYB4 626 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 OR8J3Q8NGG0 315 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 BBS10Q8TAM1 723 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 NEIL3Q8TAT5 605 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 OIT3Q8WWZ8 545 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 SARAFQ96BY9 339 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 C1GALT1C1Q96EU7 318 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 SFXN2Q96NB2 322 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 SH3GL1Q99961 368 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 TREX2Q9BQ50 279 aaPredicted RBP10.51□□□□□ -0.73
CTSA-209ENST00000493522 NANOGQ9H9S0 305 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.51□□□□□ -0.73
CTSA-209ENST00000493522 TAS2R10Q9NYW0 307 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 TNFRSF10DQ9UBN6 386 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 ANGPT4Q9Y264 503 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 VDAC3Q9Y277 283 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 CARD8Q9Y2G2 431 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 DSPPQ9NZW4 1301 aa10.51□□□□□ -0.73
CTSA-209ENST00000493522 A0A0G2JPF8 293 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 A0A1B0GVC2 190 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 OR14I1A6ND48 311 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 AGAP5A6NIR3 686 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 HNRNPCL2B2RXH8 293 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 HNRNPCL3B7ZW38 293 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 PRRG2O14669 202 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 SUSD5O60279 629 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 HNRNPCL1O60812 293 aaKnown RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 DBIP07108 87 aaKnown RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 HNRNPCL4P0DMR1 293 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ESRRAP11474 423 aaPredicted RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 IL7RP16871 459 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 RPS4Y1P22090 263 aaKnown RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 SLC6A2P23975 617 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 AQP1P29972 269 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 SSTR2P30874 369 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 SMSP52788 366 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 SUMO3P55854 103 aaPredicted RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 SKP2Q13309 424 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 C3AR1Q16581 482 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 LIN52Q52LA3 116 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 PRAMEF8Q5VWM4 474 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 PRAMEF7Q5VXH5 474 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 REEP3Q6NUK4 255 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 CBLN3Q6UW01 205 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ARSKQ6UWY0 536 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ZNF836Q6ZNA1 936 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ARPINQ7Z6K5 226 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ANKS4BQ8N8V4 417 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 C11orf65Q8NCR3 313 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 OR52P1PQ8NH57 321 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 OR10A6Q8NH74 314 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 FAM57AQ8TBR7 257 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 BCAS4Q8TDM0 211 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ZG16BQ96DA0 208 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ECSITQ9BQ95 431 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 PIF1Q9H611 641 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 TMEM38AQ9H6F2 299 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 KAT8Q9H7Z6 458 aaKnown RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 MTHFD2LQ9H903 347 aaPredicted RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 EFCAB1Q9HAE3 211 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 TINAGQ9UJW2 476 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ACAD8Q9UKU7 415 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 ZNF443Q9Y2A4 671 aaPredicted RBP10.5□□□□□ -0.73
CTSA-209ENST00000493522 SLC35A3Q9Y2D2 325 aa10.5□□□□□ -0.73
CTSA-209ENST00000493522 NCOA6Q14686 2063 aaPredicted RBP10.49□□□□□ -0.73
CTSA-209ENST00000493522 MTORP42345 2549 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 PCNX1Q96RV3 2341 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 A0A087WZY1 265 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 CLDN24A6NM45 220 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 BCKDKO14874 412 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 EIF4E2O60573 245 aaKnown RBP10.49□□□□□ -0.73
CTSA-209ENST00000493522 PCGF2P35227 344 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 P2RX1P51575 399 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 CRYZQ08257 329 aaKnown RBP10.49□□□□□ -0.73
CTSA-209ENST00000493522 CBFBQ13951 182 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 LARS2Q15031 903 aaKnown RBP10.49□□□□□ -0.73
CTSA-209ENST00000493522 DCST1Q5T197 706 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 MRPL2Q5T653 305 aaKnown RBP10.49□□□□□ -0.73
CTSA-209ENST00000493522 WLSQ5T9L3 541 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 NET1Q7Z628 596 aaPredicted RBP10.49□□□□□ -0.73
CTSA-209ENST00000493522 SERPINA11Q86U17 422 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 VRK2Q86Y07 508 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 KRT73Q86Y46 540 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 PTOV1Q86YD1 416 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 CMIPQ8IY22 773 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 ZZZ3Q8IYH5 903 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 METTL25Q8N6Q8 603 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 HIPK4Q8NE63 616 aa10.49□□□□□ -0.73
CTSA-209ENST00000493522 FAM71CQ8NEG0 241 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms