RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 YES1P07947 543 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 GUSBP08236 651 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 MYZAPP0CAP1 466 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 EFNA1P20827 205 aaPredicted RBP11.13□□□□□ -0.63
COL6A1-205ENST00000492851 MATN1P21941 496 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 FKBP2P26885 142 aaKnown RBP11.13□□□□□ -0.63
COL6A1-205ENST00000492851 CCKARP32238 428 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 RAC3P60763 192 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 VSNL1P62760 191 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 P2RY6Q15077 328 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ANXA8L1Q5VT79 327 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ANKRD34AQ69YU3 496 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 WDR93Q6P2C0 686 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 STAC2Q6ZMT1 411 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 C6orf120Q7Z4R8 191 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 LRRC34Q8IZ02 419 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 FBXO27Q8NI29 283 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 GPR119Q8TDV5 335 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 RNF128Q8TEB7 428 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 TMEM234Q8WY98 164 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ARSGQ96EG1 525 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 C3orf30Q96M34 536 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 OR7D2Q96RA2 312 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ACTR6Q9GZN1 396 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 NMUR2Q9GZQ4 415 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 TMEM185BQ9H7F4 350 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
COL6A1-205ENST00000492851 SSU72Q9NP77 194 aaKnown RBP11.13□□□□□ -0.63
COL6A1-205ENST00000492851 SERINC1Q9NRX5 453 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 CLEC4AQ9UMR7 237 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 PRRC2AP48634 2157 aaKnown RBP11.13□□□□□ -0.63
COL6A1-205ENST00000492851 MTORP42345 2549 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 NPIPB9F8W1W9 429 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 RNASET2O00584 256 aaKnown RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SIAH2O43255 324 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 KLF4O43474 513 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SKAP2O75563 359 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 G6PDP11413 515 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 UBL4AP11441 157 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 PRKCAP17252 672 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 AGTR1P30556 359 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SLC7A1P30825 629 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SFTPDP35247 375 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 ETV4P43268 484 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 HBA1P69905 142 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 FOXF1Q12946 379 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 ARHGAP11BQ3KRB8 267 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SLC25A53Q5H9E4 307 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 Q5PR19 223 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 ATAD3BQ5T9A4 648 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 CBLN3Q6UW01 205 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 CROCCP2Q86T23 111 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 KRTCAP2Q8N6L1 136 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 OR8J2Q8NGG1 315 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 TMEM171Q8WVE6 324 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 HSD17B8Q92506 261 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 OTUB1Q96FW1 271 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 SDF2Q99470 211 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 GSX2Q9BZM3 304 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 GSX1Q9H4S2 264 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-205ENST00000492851 CXorf56Q9H5V9 222 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 KLHL9Q9P2J3 617 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 KLHL13Q9P2N7 655 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 GIMAP2Q9UG22 337 aa11.12□□□□□ -0.63
COL6A1-205ENST00000492851 PRSS51A0A1B0GVH4 220 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 SERINC4A6NH21 518 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ETV2O00321 342 aaPredicted RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 TM9SF1O15321 606 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 RGS16O15492 202 aaPredicted RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 SERPINE1P05121 402 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 THBDP07204 575 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 FESP07332 822 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 PAX1P15863 534 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 SOAT1P35610 550 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF141Q15928 474 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 DPY19L1Q2PZI1 675 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 SFRP5Q5T4F7 317 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 CLEC9AQ6UXN8 241 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF704Q6ZNC4 412 aaPredicted RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 EIF3MQ7L2H7 374 aaKnown RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 FCRLAQ7L513 359 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 C16orf62Q7Z3J2 963 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 MREGQ8N565 214 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF614Q8N883 585 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ZFP90Q8TF47 636 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ROBO4Q8WZ75 1007 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 ST8SIA1Q92185 356 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 NPAS1Q99742 590 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 DPY30Q9C005 99 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms