RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 METTL11BQ5VVY1 283 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 LRIG3Q6UXM1 1119 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 STAC2Q6ZMT1 411 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 TRABD2AQ86V40 505 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 C17orf53Q8N3J3 647 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-212ENST00000492407 NATD1Q8N6N6 113 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 CCNYL1Q8N7R7 359 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 EIF1ADQ8N9N8 165 aaKnown RBP8.18□□□□□ -1.1
HDAC3-212ENST00000492407 NOA1Q8NC60 698 aaKnown RBP8.18□□□□□ -1.1
HDAC3-212ENST00000492407 STEAP2Q8NFT2 490 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 GPR151Q8TDV0 419 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 MZB1Q8WU39 189 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 TMEM171Q8WVE6 324 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 SPDL1Q96EA4 605 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 FCRL1Q96LA6 429 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 TRMOQ9BU70 441 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 UBTD1Q9HAC8 227 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 TIGARQ9NQ88 270 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 UBQLN4Q9NRR5 601 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 C1orf109Q9NX04 203 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 FREM3P0C091 2139 aa8.18□□□□□ -1.1
HDAC3-212ENST00000492407 MPDZO75970 2070 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 A0A1W2PRB8 838 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 GJE1A6NN92 205 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 H7C1Q1 480 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 EIF1AYO14602 144 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 PDPK1O15530 556 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 SEC22BO75396 215 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 NME6O75414 186 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 CNOT4O95628 575 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 OXSR1O95747 527 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 IGKV1D-16P01601 117 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 PROCP04070 461 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 THBDP07204 575 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 TUBBP07437 444 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 ELK4P28324 431 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 CRHR1P34998 444 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 GPC1P35052 558 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 RPL3P39023 403 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 EIF1AXP47813 144 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 PTH2RP49190 550 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 ZNF41P51814 821 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 FOXA1P55317 472 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 DSTNP60981 165 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 STX5Q13190 355 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 PDE7AQ13946 482 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 RNPS1Q15287 305 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 CTU2Q2VPK5 515 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 EXOSC6Q5RKV6 272 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 CEP85LQ5SZL2 805 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 MZT2BQ6NZ67 158 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 APOOLQ6UXV4 268 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 ZNF704Q6ZNC4 412 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 R3HCC1LQ7Z5L2 792 aaKnown RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 NUP43Q8NFH3 380 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 OR4C3Q8NH37 302 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 OR10D3Q8NH80 312 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 OR2V1Q8NHB1 315 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 MS4A4EQ96PG1 132 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 KLHL4Q9C0H6 718 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 HOXD1Q9GZZ0 328 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 LRTM1Q9HBL6 345 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 NGBQ9NPG2 151 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 DUSP22Q9NRW4 184 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 MED17Q9NVC6 651 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 OXSMQ9NWU1 459 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 FLRT3Q9NZU0 649 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 LAMP5Q9UJQ1 280 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 MID2Q9UJV3 735 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 EMCNQ9ULC0 261 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 POLR3HQ9Y535 204 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-212ENST00000492407 ACTL7BQ9Y614 415 aa8.17□□□□□ -1.1
HDAC3-212ENST00000492407 GXYLT2A0PJZ3 443 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 C17orf51A8MQB3 221 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 SCDO00767 359 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 HS3ST1O14792 307 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 PLIN3O60664 434 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 KCNK2O95069 426 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 CHEK2O96017 543 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 FGF4P08620 206 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 ALOX5P09917 674 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 UBL4AP11441 157 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 CPA3P15088 417 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 HPGDP15428 266 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 TCEA1P23193 301 aaKnown RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 SLC6A8P48029 635 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 PRIM2P49643 509 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 MANFP55145 182 aaKnown RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 SUMO3P55854 103 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 CARD18P57730 90 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 PPP2R2BQ00005 443 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 P2RY6Q15077 328 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 PLPPR5Q32ZL2 321 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 HBMQ6B0K9 141 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 MFSD12Q6NUT3 480 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 C22orf34Q6ZV56 151 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms