RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TNFRSF10DQ9UBN6 386 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PAIP2BQ9ULR5 123 aaKnown RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 GRIP1Q9Y3R0 1128 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 A0A0J9YY10 115 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 TMEM129A0AVI4 362 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 TRAPPC13A5PLN9 417 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 C4orf47A7E2U8 309 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 TNFSF14O43557 240 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 IMPDH2P12268 514 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 CTSEP14091 401 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 IL9P15248 144 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 MAOAP21397 527 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 RAB30Q15771 203 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 QSOX2Q6ZRP7 698 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 MRGPREQ86SM8 312 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 NR2C2APQ86WQ0 139 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 H2AFY2Q9P0M6 372 aaPredicted RBP11.52□□□□□ -0.56
HMGN1-220ENST00000492280 EML5Q05BV3 1969 aa11.52□□□□□ -0.56
HMGN1-220ENST00000492280 ASCC3Q8N3C0 2202 aaKnown RBP11.52□□□□□ -0.57
HMGN1-220ENST00000492280 A0A1W2PPK0 400 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 GABRPO00591 440 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 CHST10O43529 356 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 UBE2IP63279 158 aaKnown RBP11.52□□□□□ -0.57
HMGN1-220ENST00000492280 PSG6Q00889 435 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 FZD2Q14332 565 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 PYDC2Q56P42 97 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 RBM12BQ8IXT5 1001 aaKnown RBP11.52□□□□□ -0.57
HMGN1-220ENST00000492280 VWA5B2Q8N398 1253 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 LRRC17Q8N6Y2 441 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 NEIL3Q8TAT5 605 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 BPIFA2Q96DR5 249 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 PTGFRNQ9P2B2 879 aa11.52□□□□□ -0.57
HMGN1-220ENST00000492280 FABP12A6NFH5 140 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 URADA6NGE7 173 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 A6NL46 340 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 C17orf51A8MQB3 221 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SDC3O75056 442 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 LYPD3O95274 346 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 TNFP01375 233 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ATP1B1P05026 303 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CSF3P09919 207 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ETV6P41212 452 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 STAT5AP42229 794 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 POU6F2P78424 691 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 BNC1Q01954 994 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CRMP1Q14194 572 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SLC25A30Q5SVS4 291 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 NIPAL3Q6P499 406 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ARL9Q6T311 187 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 LYPD4Q6UWN0 246 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SYT9Q86SS6 491 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 IL17RDQ8NFM7 739 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CD180Q99467 661 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 MAP3K3Q99759 626 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF559Q9BR84 538 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CLEC4AQ9UMR7 237 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 EXOSC1Q9Y3B2 195 aaKnown RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 MAU2Q9Y6X3 613 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 PCNX3Q9H6A9 2034 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 PAICSP22234 425 aaKnown RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 OR2B6P58173 313 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 DEFA1P59665 94 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 DEFA3P59666 94 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 EOGTQ5NDL2 527 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 KLHL36Q8N4N3 616 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CDRT4Q8N9R6 151 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ALG8Q9BVK2 526 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 C11orf54Q9H0W9 315 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 NTMQ9P121 344 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 UGT2A1Q9Y4X1 527 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 TMEM184BQ9Y519 407 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 MED12Q93074 2177 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 A0A1B0GWA3 101 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 BHLHE40O14503 412 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 APOA1P02647 267 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CHRNB1P11230 501 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 DRD1P21728 446 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 GABRA5P31644 462 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 GFERP55789 205 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 FOXL2P58012 376 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 E2F1Q01094 437 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SLC3A1Q07837 685 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 CRYZQ08257 329 aaKnown RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 TPBGQ13641 420 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 PRAMEF17Q5VTA0 474 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 RSBN1Q5VWQ0 802 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF322Q6U7Q0 402 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SLC44A3Q8N4M1 653 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SLC37A3Q8NCC5 494 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 C17orf47Q8NEP4 570 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 OR52L1Q8NGH7 329 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 GPBAR1Q8TDU6 330 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ZDHHC1Q8WTX9 485 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 KISS1RQ969F8 398 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms