RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 HRNRQ86YZ3 2850 aaPredicted RBP22.18■■□□□ 1.14
UPF3A-209ENST00000492270 SERINC4A6NH21 518 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 KIAA0513O60268 411 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 AGR2O95994 175 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 UBL4AP11441 157 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 EIF1AXP47813 144 aaKnown RBP22.18■■□□□ 1.14
UPF3A-209ENST00000492270 RPS3AP61247 264 aaKnown RBP22.18■■□□□ 1.14
UPF3A-209ENST00000492270 ATAD3BQ5T9A4 648 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 VWA1Q6PCB0 445 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 FRRS1Q6ZNA5 592 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 ZZZ3Q8IYH5 903 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 GPR119Q8TDV5 335 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 LRRC46Q96FV0 321 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 ADGRG7Q96K78 797 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 CRIM1Q9NZV1 1036 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 WDR45Q9Y484 360 aa22.18■■□□□ 1.14
UPF3A-209ENST00000492270 ZNF264O43296 627 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 EFNA2O43921 213 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 IL6P05231 212 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 SHC1P29353 583 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 KIR2DL3P43628 341 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 CCR4P51679 360 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 SUMO3P55854 103 aaPredicted RBP22.17■■□□□ 1.14
UPF3A-209ENST00000492270 RAC1P63000 192 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 SIRPAP78324 504 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 SGCBQ16585 318 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 TIGD2Q4W5G0 525 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 COX20Q5RI15 118 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 PPP4R4Q6NUP7 873 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 TRIML2Q8N7C3 387 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 OR10D3Q8NH80 312 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 FBXO27Q8NI29 283 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 TCF7L2Q9NQB0 619 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 INTS9Q9NV88 658 aaKnown RBP22.17■■□□□ 1.14
UPF3A-209ENST00000492270 ZNF175Q9Y473 711 aa22.17■■□□□ 1.14
UPF3A-209ENST00000492270 A0A0J9YW62 118 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 RFXANKO14593 260 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 TNFSF11O14788 317 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 AQP8O94778 261 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 PRKCAP17252 672 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 SLC6A8P48029 635 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 IDH3AP50213 366 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 POLR2JP52435 117 aaKnown RBP22.16■■□□□ 1.14
UPF3A-209ENST00000492270 LRRC74AQ0VAA2 488 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 SKP2Q13309 424 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 SYPL1Q16563 259 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 GTDC1Q4AE62 458 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 GPAT3Q53EU6 434 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 OR2A2Q6IF42 318 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 MIER2Q8N344 545 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 CNEP1R1Q8N9A8 125 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 VPS33AQ96AX1 596 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 ZG16BQ96DA0 208 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 RBM24Q9BX46 236 aaKnown RBP22.16■■□□□ 1.14
UPF3A-209ENST00000492270 SAP130Q9H0E3 1048 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 QRSL1Q9H0R6 528 aaKnown RBP22.16■■□□□ 1.14
UPF3A-209ENST00000492270 RNF122Q9H9V4 155 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 GALNT8Q9NY28 637 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 FOXD3Q9UJU5 478 aaPredicted RBP22.16■■□□□ 1.14
UPF3A-209ENST00000492270 PACSIN3Q9UKS6 424 aa22.16■■□□□ 1.14
UPF3A-209ENST00000492270 POLR3GO15318 223 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-209ENST00000492270 CXCL13O43927 109 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 EIF4E2O60573 245 aaKnown RBP22.15■■□□□ 1.14
UPF3A-209ENST00000492270 BCAS1O75363 584 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-209ENST00000492270 CYP7B1O75881 506 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 H6PDO95479 791 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 CSTAP01040 98 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 SFTPDP35247 375 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 EIF1P41567 113 aaKnown RBP22.15■■□□□ 1.14
UPF3A-209ENST00000492270 KIR2DL2P43627 348 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-209ENST00000492270 CHRNEQ04844 493 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 LILRA2Q8N149 483 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 ZNF619Q8N2I2 560 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 ANKFN1Q8N957 763 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 OR5W2Q8NH69 310 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 ZFP90Q8TF47 636 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 STARD4Q96DR4 205 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 PIGMQ9H3S5 423 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 SLC24A3Q9HC58 644 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 POLE3Q9NRF9 147 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 STOML1Q9UBI4 398 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 OTOGQ6ZRI0 2925 aa22.15■■□□□ 1.14
UPF3A-209ENST00000492270 TGDSO95455 350 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 CRHP06850 196 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 UBTFL6P0CB48 400 aaPredicted RBP22.14■■□□□ 1.13
UPF3A-209ENST00000492270 ME2P23368 584 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 CPA2P48052 419 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 AQP5P55064 265 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 FGFBP1Q14512 234 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 QPRTQ15274 297 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 BTLAQ7Z6A9 289 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 TMEM200AQ86VY9 491 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 TOR1AIP2Q8NFQ8 470 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 OR2V1Q8NHB1 315 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 CKAP2Q8WWK9 683 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 THUMPD3Q9BV44 507 aaKnown RBP22.14■■□□□ 1.13
UPF3A-209ENST00000492270 LAT2Q9GZY6 243 aa22.14■■□□□ 1.13
UPF3A-209ENST00000492270 GPC6Q9Y625 555 aaPredicted RBP22.14■■□□□ 1.13
UPF3A-209ENST00000492270 ADAMDEC1O15204 470 aa22.13■■□□□ 1.13
UPF3A-209ENST00000492270 SMNDC1O75940 238 aaKnown RBP eCLIP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms