RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BIRC5O15392 142 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 CXCL13O43927 109 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 EIF4E2O60573 245 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SPAG7O75391 227 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 GCM2O75603 506 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SNUPNO95149 360 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 C6orf47O95873 294 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 TUBBP07437 444 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 PABPC4LP0CB38 370 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 G6PDP11413 515 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 HPGDP15428 266 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 PRKCAP17252 672 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 AGTR1P30556 359 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF41P51814 821 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 CARD18P57730 90 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SIRPAP78324 504 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 PHC1P78364 1004 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 MAD2L1Q13257 205 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 TOMM34Q15785 309 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF239Q16600 458 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 BEX5Q5H9J7 111 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 HBMQ6B0K9 141 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 GTF2IRD2BQ6EKJ0 949 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ADAM5Q6NVV9 412 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SEZ6L2Q6UXD5 910 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 DNAJC14Q6Y2X3 702 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF550Q7Z398 422 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 GTF2IRD2Q86UP8 949 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 GATSQ8NAP1 163 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF527Q8NB42 609 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 FAM71CQ8NEG0 241 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ADAMTS15Q8TE58 950 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 CPNE4Q96A23 557 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 OTUB1Q96FW1 271 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 OR7D2Q96RA2 312 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 DUSP26Q9BV47 211 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 HDHD5Q9BXW7 423 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SRXN1Q9BYN0 137 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 GSX2Q9BZM3 304 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 C20orf27Q9GZN8 174 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 SAP130Q9H0E3 1048 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 COQ10BQ9H8M1 238 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 ZNF701Q9NV72 531 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 HIVEP2P31629 2446 aa7.47□□□□□ -1.21
SMARCB1-207ENST00000491967 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 DUXAA6NLW8 204 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 GJE1A6NN92 205 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 H3BNH8 94 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ARHGEF9O43307 516 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ITM2AO43736 263 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 GMFGO60234 142 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 FCMRO60667 390 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 SYNGR4O95473 234 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 AK1P00568 194 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 OPN1LWP04000 364 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 SERPINE1P05121 402 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 THBS1P07996 1170 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 INHBBP09529 407 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ME2P23368 584 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 CTBP2P56545 445 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 RAC3P60763 192 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF844Q08AG5 666 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 FOXF1Q12946 379 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 SKP2Q13309 424 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 TP53BP2Q13625 1128 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 MPP2Q14168 576 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 RNPS1Q15287 305 aaKnown RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ARHGAP11BQ3KRB8 267 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 PDSS1Q5T2R2 415 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 OGFOD2Q6N063 350 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 BHLHB9Q6PI77 547 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 TFAP2EQ6VUC0 442 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 C6orf120Q7Z4R8 191 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 FNDC5Q8NAU1 212 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 OR5W2Q8NH69 310 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 FBXO27Q8NI29 283 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 PHOSPHO1Q8TCT1 267 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ABHD3Q8WU67 409 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF75CPQ92670 426 aaPredicted RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 TESCQ96BS2 214 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 TUBGCP3Q96CW5 907 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 PIK3IP1Q96FE7 263 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 SH3YL1Q96HL8 342 aaPredicted RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 COX4I2Q96KJ9 171 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 SORT1Q99523 831 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 USB1Q9BQ65 265 aaKnown RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 C1orf50Q9BV19 199 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF350Q9GZX5 532 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 LAT2Q9GZY6 243 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 AKTIPQ9H8T0 292 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 BCO1Q9HAY6 547 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 TIGARQ9NQ88 270 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 NOP53Q9NZM5 478 aaKnown RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 KLHL13Q9P2N7 655 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 FAF1Q9UNN5 650 aaPredicted RBP7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 CARD8Q9Y2G2 431 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 SNX8Q9Y5X2 465 aa7.46□□□□□ -1.22
SMARCB1-207ENST00000491967 ALPK2Q86TB3 2170 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms