RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FAM83FQ8NEG4 500 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 OR4N2Q8NGD1 307 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 CDS1Q92903 461 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 EFHD2Q96C19 240 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 TRIB1Q96RU8 372 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 SDF2Q99470 211 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 ECSITQ9BQ95 431 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 OSBPL11Q9BXB4 747 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 POLDIP3Q9BY77 421 aaKnown RBP9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 TBL1XR1Q9BZK7 514 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 C1orf21Q9H246 121 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 ARMC7Q9H6L4 198 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 MTHFD2LQ9H903 347 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 SLC52A3Q9NQ40 469 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 CCM2LQ9NUG4 571 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 KLRF1Q9NZS2 232 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 ARMCX1Q9P291 453 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 P2RX2Q9UBL9 471 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 GMEB1Q9Y692 573 aa9.99□□□□□ -0.81
TMEM39A-211ENST00000491685 MPDZO75970 2070 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 GXYLT2A0PJZ3 443 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 MBD3L4A6NDZ8 208 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 MBD3L3A6NE82 208 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 MBD3L5A6NJ08 208 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 SYT5O00445 386 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 GOSR1O95249 250 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 ACP2P11117 423 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 GPX2P18283 190 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 TBXA2RP21731 343 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 TIMP3P35625 211 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 DSTNP60981 165 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 EEF1A1P68104 462 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 C17orf67Q0P5P2 114 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 FBXL19-AS1Q494R0 122 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 SPATS1Q496A3 300 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 FLYWCH1Q4VC44 716 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 DCST2Q5T1A1 773 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 EEF1A1P5Q5VTE0 462 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 NSUN5P2Q63ZY6 315 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 NPSR1Q6W5P4 371 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 DNAJC14Q6Y2X3 702 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 ARPINQ7Z6K5 226 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 KIF18BQ86Y91 864 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 MISPQ8IVT2 679 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 WDSUB1Q8N9V3 476 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 CHDHQ8NE62 594 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 OR1J4Q8NGS1 313 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 MBD3L2Q8NHZ7 208 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 OIT3Q8WWZ8 545 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 RAB8BQ92930 207 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 RNASE6Q93091 150 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 LRRC58Q96CX6 371 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 ANKRD27Q96NW4 1050 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 TRNT1Q96Q11 434 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 CGREF1Q99674 301 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 CXXC4Q9H2H0 198 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 CLEC4MQ9H2X3 399 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 PTGES2Q9H7Z7 377 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 RASSF1Q9NS23 344 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 ZNF629Q9UEG4 869 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 TAGLN3Q9UI15 199 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 ABCG2Q9UNQ0 655 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 PLEKHA6Q9Y2H5 1048 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 WDR45Q9Y484 360 aa9.98□□□□□ -0.81
TMEM39A-211ENST00000491685 A0A0G2JPF8 293 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 PRAMEF25A6NGN4 478 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 A6NNC1 897 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 HNRNPCL2B2RXH8 293 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 HNRNPCL3B7ZW38 293 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 GTPBP1O00178 669 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 NDUFB5O43674 189 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 ICOSLGO75144 302 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 CBR3O75828 277 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 UTS2O95399 124 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 ACTL6AO96019 429 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 HNRNPCL4P0DMR1 293 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 CYP4B1P13584 511 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 TCEA1P23193 301 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 SLC6A2P23975 617 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 CRISP3P54108 245 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 ATP12AP54707 1039 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 CASP9P55211 416 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 MXRA7P84157 204 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 RBBP4Q09028 425 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 FOXF2Q12947 444 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 GPR68Q15743 365 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 ZSCAN26Q16670 478 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 ZSWIM7Q19AV6 140 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 TRMT5Q32P41 509 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 REP15Q6BDI9 236 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 NANOGP8Q6NSW7 305 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 ENPP6Q6UWR7 440 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 DLEU7Q6UYE1 221 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 LRRC74BQ6ZQY2 392 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 CDC20BQ86Y33 519 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 SLC30A8Q8IWU4 369 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 PEX5LQ8IYB4 626 aa9.97□□□□□ -0.81
TMEM39A-211ENST00000491685 FITM2Q8N6M3 262 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms