RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 HEPHL1Q6MZM0 1159 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 VWA1Q6PCB0 445 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 TOR1AIP2Q8NFQ8 470 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 OR10D3Q8NH80 312 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 OR2V1Q8NHB1 315 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 POC1BQ8TC44 478 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 LRRC8CQ8TDW0 803 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 XAGE5Q8WWM1 108 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 OIT3Q8WWZ8 545 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 RAB8BQ92930 207 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 ADGRG7Q96K78 797 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 MARK4Q96L34 752 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 KLHL15Q96M94 604 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 NPAS1Q99742 590 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 POLE3Q9NRF9 147 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 DNAJB12Q9NXW2 375 aaKnown RBP13.56□□□□□ -0.24
USP39-217ENST00000491659 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 ICAM5Q9UMF0 924 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 WDR45Q9Y484 360 aa13.56□□□□□ -0.24
USP39-217ENST00000491659 GPC6Q9Y625 555 aaPredicted RBP13.56□□□□□ -0.24
USP39-217ENST00000491659 CCDC154A6NI56 674 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 GJE1A6NN92 205 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 A6NNC1 897 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 A8MXE2 369 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 TNFSF11O14788 317 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 KIAA0513O60268 411 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 SLC22A3O75751 556 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 PLGP00747 810 aaPredicted RBP13.55□□□□□ -0.24
USP39-217ENST00000491659 OPN1LWP04000 364 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 IL6P05231 212 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 GUSBP08236 651 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 TXNL4AP83876 142 aaKnown RBP13.55□□□□□ -0.24
USP39-217ENST00000491659 GPAT3Q53EU6 434 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 FBXW10Q5XX13 1052 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 HBMQ6B0K9 141 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 ZNF621Q6ZSS3 439 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 MAVSQ7Z434 540 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 RNF130Q86XS8 419 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 LILRA2Q8N149 483 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 ZNF619Q8N2I2 560 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 OR5W2Q8NH69 310 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 FBXO27Q8NI29 283 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 ROPN1LQ96C74 230 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 STARD4Q96DR4 205 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 KLHDC3Q9BQ90 382 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 GPATCH1Q9BRR8 931 aaKnown RBP13.55□□□□□ -0.24
USP39-217ENST00000491659 POLDIP3Q9BY77 421 aaKnown RBP13.55□□□□□ -0.24
USP39-217ENST00000491659 ZIM2Q9NZV7 527 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 ITGB1BP2Q9UKP3 347 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 EMC9Q9Y3B6 208 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 USH1CQ9Y6N9 552 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 CSMD1Q96PZ7 3565 aa13.55□□□□□ -0.24
USP39-217ENST00000491659 TACC2O95359 2948 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 RFXANKO14593 260 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 ADAMDEC1O15204 470 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 UBDO15205 165 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CXCL13O43927 109 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 FCMRO60667 390 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CTAG2O75638 210 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 UGT2B17O75795 530 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CYP7B1O75881 506 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 AQP8O94778 261 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CSTAP01040 98 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 EPXP11678 715 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 PRKCAP17252 672 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 SFTPDP35247 375 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CDKN2CP42773 168 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 KIR2DL2P43627 348 aaPredicted RBP13.54□□□□□ -0.24
USP39-217ENST00000491659 SKP2Q13309 424 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 QPRTQ15274 297 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CTU2Q2VPK5 515 aaKnown RBP13.54□□□□□ -0.24
USP39-217ENST00000491659 TTMPQ5BVD1 217 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
USP39-217ENST00000491659 DNAJC14Q6Y2X3 702 aaPredicted RBP13.54□□□□□ -0.24
USP39-217ENST00000491659 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
USP39-217ENST00000491659 FAM214BQ7L5A3 538 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 OLIG3Q7RTU3 272 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 HDXQ7Z353 690 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 LINC01560Q8TB33 94 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 GPR119Q8TDV5 335 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 ARSGQ96EG1 525 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 MRGPRX4Q96LA9 322 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 INPP5KQ9BT40 448 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 LAT2Q9GZY6 243 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 CLEC4MQ9H2X3 399 aaPredicted RBP13.54□□□□□ -0.24
USP39-217ENST00000491659 RMND5AQ9H871 391 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 TIGARQ9NQ88 270 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 RASSF1Q9NS23 344 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 PROCRQ9UNN8 238 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 SLC35A3Q9Y2D2 325 aa13.54□□□□□ -0.24
USP39-217ENST00000491659 POLQO75417 2590 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 HEATR5AQ86XA9 2040 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 A0A0J9YW62 118 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 CENPVL1A0A0U1RR11 272 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 HMGN4O00479 90 aa13.53□□□□□ -0.24
USP39-217ENST00000491659 ZNF195O14628 629 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms