RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PLPP2O43688 288 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 PRAF2O60831 178 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 HMGN1P05114 100 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 ALPPL2P10696 532 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 CD53P19397 219 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 RAB3BP20337 219 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 CCR8P51685 355 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 TRAM1Q15629 374 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 PRAMEF14Q5SWL7 426 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 MPP7Q5T2T1 576 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 PRAMEF13Q5VWM6 474 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 PXKQ7Z7A4 578 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 NKAIN4Q8IVV8 208 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 GJD3Q8N144 294 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 C2orf73Q8N5S3 287 aaPredicted RBP18■□□□□ 0.47
SNAPC3-206ENST00000490969 SIPA1Q96FS4 1042 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 LCORQ96JN0 433 aaPredicted RBP18■□□□□ 0.47
SNAPC3-206ENST00000490969 GLIPR2Q9H4G4 154 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 AUNIPQ9H7T9 357 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 NPDC1Q9NQX5 325 aaPredicted RBP18■□□□□ 0.47
SNAPC3-206ENST00000490969 PIPOXQ9P0Z9 390 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 CAMK2AQ9UQM7 478 aa18■□□□□ 0.47
SNAPC3-206ENST00000490969 GSTZ1O43708 216 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 TMPRSS11DO60235 418 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 LPLP06858 475 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 GDNFP39905 211 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 VEGFCP49767 419 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 PRKAG1P54619 331 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 ZNF658BQ4V348 819 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 GID4Q8IVV7 300 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 SORCS1Q8WY21 1168 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 ZNF707Q96C28 371 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 LRRC3BQ96PB8 259 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 IL17FQ96PD4 163 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 MGAT4CQ9UBM8 478 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 PFDN2Q9UHV9 154 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 POM121CA8CG34 1229 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 GMDSO60547 372 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 ATF1P18846 271 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 TRHRP34981 398 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 GCGRP47871 477 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 METTL11BQ5VVY1 283 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 GET4Q7L5D6 327 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 NRMQ8IXM6 262 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 LINC00518Q8N0U6 118 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 COQ8AQ8NI60 647 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 SMIM4Q8WVI0 70 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 NR4A3Q92570 626 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 MS4A8Q9BY19 250 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 MED20Q9H944 212 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 MRPL15Q9P015 296 aaKnown RBP17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 SLC13A4Q9UKG4 626 aa17.99■□□□□ 0.47
SNAPC3-206ENST00000490969 A0A0G2JPF8 293 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 HNRNPCL2B2RXH8 293 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 HNRNPCL3B7ZW38 293 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 KLF4O43474 513 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 PI15O43692 258 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 SC5DO75845 299 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 WDPCPO95876 746 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 MT-ND5P03915 603 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 SERPIND1P05546 499 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 FCER2P06734 321 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 HNRNPCL4P0DMR1 293 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 KIAA1024LP59773 190 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 ZNF311Q5JNZ3 666 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 NIPAL3Q6P499 406 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 LRFN4Q6PJG9 635 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 FAM98AQ8NCA5 519 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 C17orf47Q8NEP4 570 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 OR10H4Q8NGA5 316 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 ACOT11Q8WXI4 607 aaPredicted RBP17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 SAMD8Q96LT4 415 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 OR10A4Q9H209 315 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 LHX9Q9NQ69 397 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 PIP5K1CO60331 668 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 PROS1P07225 676 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 CEBPBP17676 345 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 NDUFV2P19404 249 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 NFYAP23511 347 aaPredicted RBP17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 STXBP1P61764 594 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 MLC1Q15049 377 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 SFRP5Q5T4F7 317 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 MEPCEQ7L2J0 689 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 STPG2Q8N412 459 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 FAM71CQ8NEG0 241 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 SETD7Q8WTS6 366 aaKnown RBP17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 PIGKQ92643 395 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 LMLNQ96KR4 655 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 AMDHD1Q96NU7 426 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 ARHGDIGQ99819 225 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 NDC1Q9BTX1 674 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 ANKRD19PQ9H560 264 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 ABRACLQ9P1F3 81 aa17.98■□□□□ 0.47
SNAPC3-206ENST00000490969 A0A1B0GUH1 482 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 OR6C65A6NJZ3 312 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 SYT5O00445 386 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 FGF2P09038 288 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 SAGP10523 405 aaPredicted RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 PSMB1P20618 241 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms