RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 RFX4Q33E94 735 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF770Q6IQ21 691 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 GDF7Q7Z4P5 450 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 OR10G2Q8NGC3 310 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 OR52J3Q8NH60 311 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 SLC7A13Q8TCU3 470 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 MAGEE2Q8TD90 523 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 THAP4Q8WY91 577 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 PSMF1Q92530 271 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 SLC41A3Q96GZ6 507 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 NODALQ96S42 347 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 PRR14Q9BWN1 585 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 TMEM27Q9HBJ8 222 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 A0A0B4J2E0 115 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 A0A1B0GX12 115 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 GTPBP1O00178 669 aaKnown RBP12.95□□□□□ -0.34
VPS26A-205ENST00000489656 OIP5O43482 229 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 CCNB2O95067 398 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 ANGPTL1O95841 491 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 THY1P04216 161 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 UQCRBP14927 111 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 ACADSP16219 412 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 CBLP22681 906 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 DAPP51397 102 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 SOX8P57073 446 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 ZNF117Q03924 483 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 FOXC1Q12948 553 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 SNTA1Q13424 505 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 LAPTM4AQ15012 233 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 MEP1AQ16819 746 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 NHSL2Q5HYW2 709 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
VPS26A-205ENST00000489656 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 GPALPP1Q8IXQ4 340 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
VPS26A-205ENST00000489656 ASB15Q8WXK1 588 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 SLC38A4Q969I6 547 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 NTNG2Q96CW9 530 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 CCNL2Q96S94 520 aaPredicted RBP12.95□□□□□ -0.34
VPS26A-205ENST00000489656 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 SMURF2Q9HAU4 748 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 SH2D2AQ9NP31 389 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 ATP13A2Q9NQ11 1180 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 NTNG1Q9Y2I2 539 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 FREM3P0C091 2139 aa12.95□□□□□ -0.34
VPS26A-205ENST00000489656 DCHS1Q96JQ0 3298 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 AKAP13Q12802 2813 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 IGLV3-32A0A0A0MS00 114 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 MASP2O00187 686 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 CHP2O43745 196 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 MAN1A2O60476 641 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 OR6B1O95007 311 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 PRKACGP22612 351 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 PTGDSP41222 190 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 RAD23AP54725 363 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 RRADP55042 308 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 C17orf67Q0P5P2 114 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 SEC23BQ15437 767 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 ACER2Q5QJU3 275 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 CBLN3Q6UW01 205 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 VASH2Q86V25 355 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 GATSQ8NAP1 163 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 OR10G3Q8NGC4 313 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 DNAJA4Q8WW22 397 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-205ENST00000489656 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-205ENST00000489656 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 ARSGQ96EG1 525 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 NAF1Q96HR8 494 aaKnown RBP12.94□□□□□ -0.34
VPS26A-205ENST00000489656 THOC3Q96J01 351 aaKnown RBP12.94□□□□□ -0.34
VPS26A-205ENST00000489656 MPP4Q96JB8 637 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 FEVQ99581 238 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 PRSS27Q9BQR3 290 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 LHPPQ9H008 270 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 CPNE5Q9HCH3 593 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 CTPS2Q9NRF8 586 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 ICAM5Q9UMF0 924 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 MGAT4BQ9UQ53 548 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 CARD8Q9Y2G2 431 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 ORC6Q9Y5N6 252 aa12.94□□□□□ -0.34
VPS26A-205ENST00000489656 CHCHD2Q9Y6H1 151 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-205ENST00000489656 A0A087WUU8 490 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 GPR37O15354 613 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 DENRO43583 198 aaKnown RBP12.93□□□□□ -0.34
VPS26A-205ENST00000489656 HCRTR2O43614 444 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 SCO2O43819 266 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 ADAP00813 363 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 LINGO3P0C6S8 592 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 CDH2P19022 906 aaPredicted RBP12.93□□□□□ -0.34
VPS26A-205ENST00000489656 IGFBP5P24593 272 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 MSX1P28360 303 aa12.93□□□□□ -0.34
VPS26A-205ENST00000489656 P2RX1P51575 399 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms