RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CGAP01215 116 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 CRHP06850 196 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 FCGR2AP12318 317 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 ME2P23368 584 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 CCKARP32238 428 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 P2RX1P51575 399 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 RAC1P63000 192 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 FUT5Q11128 374 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 CASP8Q14790 479 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 GUSBP1Q15486 140 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 ANXA8L1Q5VT79 327 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 NXNQ6DKJ4 435 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 OGFOD2Q6N063 350 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF550Q7Z398 422 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 MTERF4Q7Z6M4 381 aaKnown RBP12.56□□□□□ -0.4
VTI1A-206ENST00000489142 GPR119Q8TDV5 335 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 XAGE5Q8WWM1 108 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 ROBO4Q8WZ75 1007 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 TESCQ96BS2 214 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 KLHL15Q96M94 604 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 WFIKKN1Q96NZ8 548 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 SLC35A5Q9BS91 424 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 INPP5KQ9BT40 448 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 SRXN1Q9BYN0 137 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 AIG1Q9NVV5 245 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 THAP1Q9NVV9 213 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 NKIRAS1Q9NYS0 192 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 C6orf203Q9P0P8 240 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-206ENST00000489142 STOML1Q9UBI4 398 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 PROCRQ9UNN8 238 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 TESMINQ9Y4I5 508 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 UQCRHLA0A096LP55 91 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 A0A1W2PPR1 153 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 ADAMDEC1O15204 470 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 BCAS1O75363 584 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 SYNGR4O95473 234 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 GSNP06396 782 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 UBL4AP11441 157 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 POU2F1P14859 743 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 UQCRC2P22695 453 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 CHI3L1P36222 383 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 CD79BP40259 229 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 CDKN2CP42773 168 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 CLNS1AP54105 237 aaKnown RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 MAPK14Q16539 360 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 ARHGAP11BQ3KRB8 267 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 SAXO2Q658L1 398 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 ANKRD34AQ69YU3 496 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 ESPNLQ6ZVH7 1005 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 MAVSQ7Z434 540 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 CHDHQ8NE62 594 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 PNPT1Q8TCS8 783 aaKnown RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 OSTF1Q92882 214 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 ZC3HAV1LQ96H79 300 aaKnown RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 DACH2Q96NX9 599 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 MANSC1Q9H8J5 431 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 HHATLQ9HCP6 504 aa12.55□□□□□ -0.4
VTI1A-206ENST00000489142 MCTS1Q9ULC4 181 aaKnown RBP12.55□□□□□ -0.4
VTI1A-206ENST00000489142 PRRC2AP48634 2157 aaKnown RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 IGHV3-15A0A0B4J1V0 119 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 SERINC4A6NH21 518 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 DUXAA6NLW8 204 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF195O14628 629 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 HDAC3O15379 428 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 SIAH2O43255 324 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF264O43296 627 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 STX11O75558 287 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 UGT2B17O75795 530 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 HRGP04196 525 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 UBTFL6P0CB48 400 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 PRKCAP17252 672 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 UGT2B10P36537 528 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 EIF1P41567 113 aaKnown RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 KHKP50053 298 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 SUMO3P55854 103 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 CTBP2P56545 445 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 EEF1A1P68104 462 aaKnown RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 OCRLQ01968 901 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 SKP2Q13309 424 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 QPRTQ15274 297 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 TMEM176BQ3YBM2 270 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 EEF1A1P5Q5VTE0 462 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 TYW3Q6IPR3 259 aaKnown RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 DNAJC14Q6Y2X3 702 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 C22orf34Q6ZV56 151 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 SPATA19Q7Z5L4 167 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 KIRREL3Q8IZU9 778 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 VPS37AQ8NEZ2 397 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 CCDC115Q96NT0 180 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 OR52E6Q96RD3 313 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 MED18Q9BUE0 208 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 KLHL4Q9C0H6 718 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 NMUR2Q9GZQ4 415 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms