RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 XKR4Q5GH76 650 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 PXDC1Q5TGL8 231 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 EEF1A1P5Q5VTE0 462 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 TWF2Q6IBS0 349 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 OR52W1Q6IF63 320 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 CCDC137Q6PK04 289 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 SHC4Q6S5L8 630 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 ENPP6Q6UWR7 440 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 HACD2Q6Y1H2 254 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 FRA10AC1Q70Z53 315 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 HDDC2Q7Z4H3 204 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 YTHDF3Q7Z739 585 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 LRRC8AQ8IWT6 810 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 ODF3L1Q8IXM7 274 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 C12orf56Q8IXR9 622 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 GPR65Q8IYL9 337 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 DND1Q8IYX4 353 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 KBTBD3Q8NAB2 608 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 OR7G1Q8NGA0 311 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 OR6S1Q8NH40 331 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 FCAMRQ8WWV6 532 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 RTP4Q96DX8 246 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 NUS1Q96E22 293 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 C3orf30Q96M34 536 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 OPALINQ96PE5 141 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 SH3GL1Q99961 368 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 TMEM246Q9BRR3 403 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 NIPSNAP3BQ9BS92 247 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 SLC25A33Q9BSK2 321 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 MCRIP2Q9BUT9 160 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 QTRT1Q9BXR0 403 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 PRRG3Q9BZD7 231 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 HDHD2Q9H0R4 259 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 NIPAL2Q9H841 368 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 ADAP2Q9NPF8 381 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 INPP5EQ9NRR6 644 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 ELOVL5Q9NYP7 299 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 POLKQ9UBT6 870 aa2.94□□□□□ -1.94
PRPF4-203ENST00000488937 EXOSC1Q9Y3B2 195 aaKnown RBP2.94□□□□□ -1.94
PRPF4-203ENST00000488937 SMIM35A0A1B0GVV1 85 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 A0A1W2PPI3 338 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 TMEM120BA0PK00 339 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 LRIT2A6NDA9 550 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 E5RJQ4 531 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 ZNF587BE7ETH6 402 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 CFLARO15519 480 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 RGS14O43566 566 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SPRY3O43610 288 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 GMDSO60547 372 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 CDK2AP2O75956 126 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 NR3C1P04150 777 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SERPIND1P05546 499 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 HOXC6P09630 235 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 UBCP0CG48 685 aaKnown RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 BCKDHAP12694 445 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 CD82P27701 267 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 PSMB6P28072 239 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 GTF2E2P29084 291 aaKnown RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 C21orf33P30042 268 aaPredicted RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 YWHABP31946 246 aaKnown RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 CFHR2P36980 270 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 MMP12P39900 470 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 BDKRB1P46663 353 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 RGRP47804 291 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 NPBWR2P48146 333 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 ATP5J2P56134 94 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 TMEM50BP56557 158 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 TNNC1P63316 161 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 PLOD1Q02809 727 aaPredicted RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SIGLEC14Q08ET2 396 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 TRAF3Q13114 568 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 VGLL4Q14135 290 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 KIR2DS3Q14952 304 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 BCL2A1Q16548 175 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 ZNF74Q16587 644 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SLC5A12Q1EHB4 618 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 ODF3L2Q3SX64 289 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 TMEM52BQ4KMG9 183 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SPANXN4Q5MJ08 99 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 LY6G6FQ5SQ64 297 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 BEND6Q5SZJ8 279 aaPredicted RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 DDI2Q5TDH0 399 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 OTUD1Q5VV17 481 aaPredicted RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SLC22A10Q63ZE4 541 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 PTRHD1Q6GMV3 140 aaKnown RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 SLC18B1Q6NT16 456 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 ACSM5Q6NUN0 579 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 NEPROQ6NW34 567 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 BTNL3Q6UXE8 466 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 LEKR1Q6ZMV7 388 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 FCRLAQ7L513 359 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 ARCQ7LC44 396 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 HSD11B1LQ7Z5J1 315 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 MARCH9Q86YJ5 346 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 MMAAQ8IVH4 418 aaKnown RBP2.93□□□□□ -1.94
PRPF4-203ENST00000488937 APRG1Q8IVJ8 170 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 CMTM8Q8IZV2 173 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 KRT222Q8N1A0 295 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 CENPSQ8N2Z9 138 aa2.93□□□□□ -1.94
PRPF4-203ENST00000488937 PGBD5Q8N414 524 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms