RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	TOR1AIP2	Q8NFQ8	470 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	RFWD2	Q8NHY2	731 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	GPR119	Q8TDV5	335 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	PKNOX2	Q96KN3	472 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	PPP1R36	Q96LQ0	422 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZIM3	Q96PE6	472 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR7D2	Q96RA2	312 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	CCL19	Q99731	98 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	KLHDC3	Q9BQ90	382 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	C12orf49	Q9H741	205 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	AKTIP	Q9H8T0	292 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	GPR52	Q9Y2T5	361 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	ACTL7B	Q9Y614	415 aa		11.13	□□□□□ -0.63
SREBF1-215	ENST00000487401	C2CD3	Q4AC94	2353 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	BIRC5	O15392	142 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	ITM2A	O43736	263 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	EIF4E2	O60573	245 aa	Known RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	CYP7B1	O75881	506 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	AK1	P00568	194 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	ADSL	P30566	484 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	CCR4	P51679	360 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	C21orf58	P58505	322 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	ABCE1	P61221	599 aa	Known RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	RPS26	P62854	115 aa	Known RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	RNPS1	Q15287	305 aa	Known RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.12	□□□□□ -0.63	3e-9	■■■■■ 39.1
SREBF1-215	ENST00000487401	STAC2	Q6ZMT1	411 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	LRRC75A-AS1	Q8N1F1	130 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	VPS37A	Q8NEZ2	397 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR5D16	Q8NGK9	328 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR4A15	Q8NGL6	344 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR5W2	Q8NH69	310 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	CPNE4	Q96A23	557 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	POM121	Q96HA1	1249 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	C18orf12	Q96KH6	178 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	MRGPRX4	Q96LA9	322 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	HS3ST6	Q96QI5	342 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	SDF2	Q99470	211 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	DPY30	Q9C005	99 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	ACTR6	Q9GZN1	396 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	CENPH	Q9H3R5	247 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	EXD2	Q9NVH0	621 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	ASIC5	Q9NY37	505 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	ICAM5	Q9UMF0	924 aa		11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-215	ENST00000487401	PRRC2A	P48634	2157 aa	Known RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	KIAA1549	Q9HCM3	1950 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	RNF103-CHMP3	A0A140T963	221 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	SERINC4	A6NH21	518 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	NPIPB9	F8W1W9	429 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	RNASET2	O00584	256 aa	Known RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZNF264	O43296	627 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	STX11	O75558	287 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	PRKD3	O94806	890 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	SNUPN	O95149	360 aa	Known RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	THBD	P07204	575 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	UBL4A	P11441	157 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	SHC1	P29353	583 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	AGTR1	P30556	359 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	SLC7A1	P30825	629 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	RPL14	P50914	215 aa	Known RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	NR1H2	P55055	460 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	CBFB	Q13951	182 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	GPR68	Q15743	365 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	TOMM34	Q15785	309 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZNF239	Q16600	458 aa	Known RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	NDUFAF6	Q330K2	333 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	KRTAP21-3	Q3LHN1	58 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401		Q5PR19	223 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	PDZK1	Q5T2W1	519 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ATAD3B	Q5T9A4	648 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ANXA8L1	Q5VT79	327 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR4F3	Q6IEY1	312 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ALKBH2	Q6NS38	261 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	C22orf34	Q6ZV56	151 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	PLEKHM3	Q6ZWE6	761 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	FCRLA	Q7L513	359 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	C16orf62	Q7Z3J2	963 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	WFDC8	Q8IUA0	241 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	CLECL1	Q8IZS7	167 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	KIRREL3	Q8IZU9	778 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	MREG	Q8N565	214 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ZNF781	Q8N8C0	355 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	STEAP2	Q8NFT2	490 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	ABHD3	Q8WU67	409 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	SLC35G5	Q96KT7	338 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	MARK4	Q96L34	752 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	HDHD5	Q9BXW7	423 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	SRXN1	Q9BYN0	137 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	NMUR2	Q9GZQ4	415 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	OR10A4	Q9H209	315 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	KCNK9	Q9NPC2	374 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	RAP2C	Q9Y3L5	183 aa		11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401		V9GYY5	206 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF1-215	ENST00000487401	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-215	ENST00000487401	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-215	ENST00000487401	TM9SF1	O15321	606 aa		11.1	□□□□□ -0.63
SREBF1-215	ENST00000487401	KLF4	O43474	513 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms