RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 B9D1Q9UPM9 204 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 PSG11Q9UQ72 335 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 CHMP2BQ9UQN3 213 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 EIF3LQ9Y262 564 aaKnown RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 MFHAS1Q9Y4C4 1052 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 AP4B1Q9Y6B7 739 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ZSCAN5BA6NJL1 495 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 USP27XA6NNY8 438 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 DUX1O43812 170 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 MBD3O95983 291 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 PGK1P00558 417 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CHRNA1P02708 482 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CALCBP10092 127 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 TNNI3P19429 210 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 RPL4P36578 427 aaKnown RBP2.01□□□□□ -2.09
GCFC2-209ENST00000486016 DLSTP36957 453 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 RPS10P46783 165 aaKnown RBP2.01□□□□□ -2.09
GCFC2-209ENST00000486016 OSTNP61366 133 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CYP51A1Q16850 503 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 TMEM41BQ5BJD5 291 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 MEDAGQ5VYS4 303 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 SULT1C3Q6IMI6 304 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 LRRC8BQ6P9F7 803 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CBLN3Q6UW01 205 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 STAC2Q6ZMT1 411 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CENPUQ71F23 418 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 HSD11B1LQ7Z5J1 315 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 ZNF573Q86YE8 665 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 NICN1Q9BSH3 213 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 THUMPD2Q9BTF0 503 aaKnown RBP2.01□□□□□ -2.09
GCFC2-209ENST00000486016 ZNF416Q9BWM5 594 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 RSPO3Q9BXY4 272 aaPredicted RBP2.01□□□□□ -2.09
GCFC2-209ENST00000486016 NFKBIZQ9BYH8 718 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 NXF3Q9H4D5 531 aaKnown RBP2.01□□□□□ -2.09
GCFC2-209ENST00000486016 WDR76Q9H967 626 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CALHM2Q9HA72 323 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 POLD4Q9HCU8 107 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 RDH8Q9NYR8 311 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 GALPQ9UBC7 116 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 RNF6Q9Y252 685 aa2.01□□□□□ -2.09
GCFC2-209ENST00000486016 KIF26AQ9ULI4 1882 aaPredicted RBP2.01□□□□□ -2.09
GCFC2-209ENST00000486016 USP6P35125 1406 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 FAM74A7A6NL05 159 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 JAK2O60674 1132 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 ZNF254O75437 659 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 STX11O75558 287 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 LYPLA1O75608 230 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 GUCA1CO95843 209 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 HEXBP07686 556 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 BCKDHAP12694 445 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 H2AFXP16104 143 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 DESP17661 470 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 GABRR1P24046 479 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 PTBP1P26599 531 aaKnown RBP eCLIP2□□□□□ -2.09
GCFC2-209ENST00000486016 HPDP32754 393 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 CDH5P33151 784 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 KIF5BP33176 963 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 ACAA2P42765 397 aaKnown RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 NOVA1P51513 510 aaKnown RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 BCL2L1Q07817 233 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 FAM74A3Q4VXF1 159 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 DNAJC21Q5F1R6 531 aaKnown RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 FAM120AOSQ5T036 256 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 RIPPLY2Q5TAB7 128 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 LANCL3Q6ZV70 420 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 HSD17B13Q7Z5P4 300 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 IFNEQ86WN2 208 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 GRAMD2AQ8IUY3 354 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 MCOLN2Q8IZK6 566 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 CENPLQ8N0S6 344 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 BPIFB2Q8N4F0 458 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 CSNK1A1LQ8N752 337 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 FADS6Q8N9I5 356 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 MYDGFQ969H8 173 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 GPA33Q99795 319 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 FEM1AQ9BSK4 669 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 GSDMCQ9BYG8 508 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 POLR3FQ9H1D9 316 aaPredicted RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 DHX33Q9H6R0 707 aaKnown RBP2□□□□□ -2.09
GCFC2-209ENST00000486016 COG4Q9H9E3 785 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 SLC35D1Q9NTN3 355 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 EHFQ9NZC4 300 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 ONECUT1Q9UBC0 465 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 GMPPBQ9Y5P6 360 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 AP1M2Q9Y6Q5 423 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 SLIT3O75094 1523 aa2□□□□□ -2.09
GCFC2-209ENST00000486016 CARMIL1Q5VZK9 1371 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 A0A1B0GWJ7 208 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 ESYT2A0FGR8 921 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 SAGE2PA6NJ88 616 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 DLGAP1O14490 977 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 TRAF3IP2O43734 574 aaPredicted RBP1.99□□□□□ -2.09
GCFC2-209ENST00000486016 EFNA2O43921 213 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 PEX11AO75192 247 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 TRIM3O75382 744 aaPredicted RBP1.99□□□□□ -2.09
GCFC2-209ENST00000486016 ANP32DO95626 131 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 OPN1LWP04000 364 aa1.99□□□□□ -2.09
GCFC2-209ENST00000486016 PTMAP06454 111 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms