RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CBFBQ13951 182 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 TOMM34Q15785 309 aaPredicted RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 PLPPR5Q32ZL2 321 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 LIN52Q52LA3 116 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 NHSL2Q5HYW2 709 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 MRPL2Q5T653 305 aaKnown RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 PRAMEF8Q5VWM4 474 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 PRAMEF7Q5VXH5 474 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 ENPP6Q6UWR7 440 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 PTOV1Q86YD1 416 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 ULK2Q8IYT8 1036 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 UBQLNLQ8IYU4 475 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 EID3Q8N140 333 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 RPRMLQ8N4K4 120 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 C11orf65Q8NCR3 313 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 CCDC197Q8NCU1 140 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 HIPK4Q8NE63 616 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 OR8J3Q8NGG0 315 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 OR5W2Q8NH69 310 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 GPR119Q8TDV5 335 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 CNOT9Q92600 299 aaKnown RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 PMM1Q92871 262 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 ZBTB8AQ96BR9 441 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 CMTM5Q96DZ9 223 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 CCDC120Q96HB5 630 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 RNF145Q96MT1 663 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 LRRC37BQ96QE4 947 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 NPAS1Q99742 590 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 SH3GL1Q99961 368 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 TMEM38AQ9H6F2 299 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 KAT8Q9H7Z6 458 aaKnown RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 ZNF443Q9Y2A4 671 aaPredicted RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 MEMO1Q9Y316 297 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 HEATR5AQ86XA9 2040 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 CLEC18AA5D8T8 446 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 E9PLN8 166 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 H0Y3Z8 333 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 SEC14L5O43304 696 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ZG16O60844 167 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 WDR1O75083 606 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 NPPAP01160 153 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 LINGO3P0C6S8 592 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 RNF224P0DH78 156 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ZNF17P17021 662 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 CHMP24386 653 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ACVR2AP27037 513 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 PRDX6P30041 224 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 LHX2P50458 406 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 PLAURQ03405 335 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ART3Q13508 389 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 LARS2Q15031 903 aaKnown RBP10.71□□□□□ -0.69
HPS4-214ENST00000485842 QPRTQ15274 297 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ADRM1Q16186 407 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 GLYR1Q49A26 553 aaPredicted RBP10.71□□□□□ -0.69
HPS4-214ENST00000485842 ZNF311Q5JNZ3 666 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 AP1ARQ63HQ0 302 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 CLEC18BQ6UXF7 455 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 KRT73Q86Y46 540 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 CMIPQ8IY22 773 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ZZZ3Q8IYH5 903 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 PM20D2Q8IYS1 436 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 GTPBP8Q8N3Z3 284 aaPredicted RBP10.71□□□□□ -0.69
HPS4-214ENST00000485842 METTL25Q8N6Q8 603 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 CLEC18CQ8NCF0 446 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 FAM71CQ8NEG0 241 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 FBXO27Q8NI29 283 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ZNF563Q8TA94 476 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 WDYHV1Q96HA8 205 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 ECSITQ9BQ95 431 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 VKORC1Q9BQB6 163 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 DIDO1Q9BTC0 2240 aaKnown RBP10.71□□□□□ -0.69
HPS4-214ENST00000485842 PRDM14Q9GZV8 571 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 EFCAB1Q9HAE3 211 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 BCL2L10Q9HD36 194 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 RLIMQ9NVW2 624 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 DNAJB12Q9NXW2 375 aaKnown RBP10.71□□□□□ -0.69
HPS4-214ENST00000485842 ZNF337Q9Y3M9 751 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.69
HPS4-214ENST00000485842 FLNCQ14315 2725 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 CCT8L1PA6NM43 557 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 NDUFAB1O14561 156 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 LDLRP01130 860 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 OPN1SWP03999 348 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 THBS1P07996 1170 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 PABPC4LP0CB38 370 aaKnown RBP10.7□□□□□ -0.7
HPS4-214ENST00000485842 PEPDP12955 493 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 GABRA1P14867 456 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ETS2P15036 469 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ZNF708P17019 499 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 PRKCAP17252 672 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 PGCP20142 388 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 PCGF2P35227 344 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 SLC7A2P52569 658 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 CLDN18P56856 261 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 EEF1A1P68104 462 aaKnown RBP10.7□□□□□ -0.7
HPS4-214ENST00000485842 RBBP4Q09028 425 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ACSF3Q4G176 576 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms