RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CDKN1AP38936 164 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 MAGEA11P43364 429 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SLC6A9P48067 706 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PXNP49023 591 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SUOXP51687 545 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 CDH13P55290 713 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 KRTAP10-9P60411 292 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PSME3P61289 254 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ARF6P62330 175 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ACVR1Q04771 509 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SULT2A1Q06520 285 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 FOXM1Q08050 763 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PON3Q15166 354 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 VWC2Q2TAL6 325 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 NDUFAF6Q330K2 333 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ALKBH6Q3KRA9 238 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 MGAT5BQ3V5L5 792 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TECRLQ5HYJ1 363 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 LRRC73Q5JTD7 316 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TEX30Q5JUR7 227 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SAMD4BQ5PRF9 694 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PPM1LQ5SGD2 360 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 KHDRBS2Q5VWX1 349 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 LIPNQ5VXI9 398 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 BSPRYQ5W0U4 402 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TBC1D3GQ6DHY5 549 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TMEM211Q6ICI0 200 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TBC1D3CQ6IPX1 549 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 FBXO42Q6P3S6 717 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 C17orf99Q6UX52 265 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 Q6ZPB1 254 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 Q6ZVL8 140 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ERASQ7Z444 233 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ZFAND4Q86XD8 727 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 HIPK1Q86Z02 1210 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ERI1Q8IV48 349 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 FAM219AQ8IW50 185 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 MFSD6LQ8IWD5 586 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 AQP12AQ8IXF9 295 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TBC1D3Q8IZP1 549 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 GCNT2Q8N0V5 402 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 METTL25Q8N6Q8 603 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PAPD5Q8NDF8 572 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 BEND2Q8NDZ0 799 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ACVR1CQ8NER5 493 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PROKR2Q8NFJ6 384 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 OR4D6Q8NGJ1 314 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 OR5D18Q8NGL1 313 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ZFP28Q8NHY6 868 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RHEBL1Q8TAI7 183 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 HMGCLL1Q8TB92 370 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 MCOLN3Q8TDD5 553 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 KCTD4Q8WVF5 259 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RAB40AQ8WXH6 277 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 CACNG8Q8WXS5 425 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TFAP2CQ92754 450 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RIT1Q92963 219 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 EMG1Q92979 244 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TADA1Q96BN2 335 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 S100PBPQ96BU1 408 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 DCPSQ96C86 337 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 MTERF3Q96E29 417 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 OMA1Q96E52 524 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 L3HYPDHQ96EM0 354 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SMARCD1Q96GM5 515 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PCED1BQ96HM7 432 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SLC45A3Q96JT2 553 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 KLHL32Q96NJ5 620 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 BIRC8Q96P09 236 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PKMYT1Q99640 499 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 HOPXQ9BPY8 73 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 TBL1YQ9BQ87 522 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 H2AFJQ9BTM1 129 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ABHD6Q9BV23 337 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 YTHDF1Q9BYJ9 559 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RACGAP1Q9H0H5 632 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SLC25A51Q9H1U9 297 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 FN3KQ9H479 309 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 NXF3Q9H4D5 531 aaKnown RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 LDAHQ9H6V9 325 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 WDR55Q9H6Y2 383 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SP140LQ9H930 580 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 POPDC3Q9HBV1 291 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RANGRFQ9HD47 186 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 SPAG4Q9NPE6 437 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 DYRK4Q9NR20 520 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 C20orf141Q9NUB4 165 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 UFSP2Q9NUQ7 469 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 ZNF701Q9NV72 531 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 USE1Q9NZ43 259 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 XPR1Q9UBH6 696 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 OR12D3Q9UGF7 316 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 PACSIN3Q9UKS6 424 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 FAF1Q9UNN5 650 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RCE1Q9Y256 329 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 FOXA2Q9Y261 457 aaPredicted RBP3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 RASD1Q9Y272 281 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 CHST2Q9Y4C5 530 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 INSL6Q9Y581 213 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms