RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SLC6A15Q9H2J7 730 aa18.08■□□□□ 0.48
COL6A2-208ENST00000485591 RLIMQ9NVW2 624 aa18.08■□□□□ 0.48
COL6A2-208ENST00000485591 TAS2R10Q9NYW0 307 aa18.08■□□□□ 0.48
COL6A2-208ENST00000485591 ZNF407Q9C0G0 2248 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 FAM47E-STBD1D6RA91 191 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 ZIC3O60481 467 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 CYP7B1O75881 506 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 HK1P19367 917 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 HTR1EP28566 365 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 SLC6A8P48029 635 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 CCR4P51679 360 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 CRYBA2P53672 197 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 DMTNQ08495 405 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 PLPPR5Q32ZL2 321 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 GLYR1Q49A26 553 aaPredicted RBP18.07■□□□□ 0.48
COL6A2-208ENST00000485591 ARHGAP11AQ6P4F7 1023 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 ARSKQ6UWY0 536 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 GFRALQ6UXV0 394 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 YRDCQ86U90 279 aaKnown RBP18.07■□□□□ 0.48
COL6A2-208ENST00000485591 SPPL2CQ8IUH8 684 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 ZNF440Q8IYI8 595 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 ARHGAP24Q8N264 748 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 RNF148Q8N7C7 305 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 NEIL3Q8TAT5 605 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 GPR119Q8TDV5 335 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 SLC35B4Q969S0 331 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 TAMM41Q96BW9 452 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 LDAHQ9H6V9 325 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 MED17Q9NVC6 651 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 CD300AQ9UGN4 299 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 PRPF19Q9UMS4 504 aaKnown RBP18.07■□□□□ 0.48
COL6A2-208ENST00000485591 VDAC3Q9Y277 283 aa18.07■□□□□ 0.48
COL6A2-208ENST00000485591 SMG1Q96Q15 3661 aaKnown RBP18.06■□□□□ 0.48
COL6A2-208ENST00000485591 C7orf72A4D263 438 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 CXCR6O00574 342 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 AQP7O14520 342 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 GSTA4O15217 222 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 NUDT14O95848 222 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 OPN1SWP03999 348 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 LINGO3P0C6S8 592 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 FOXK1P85037 733 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 HSF1Q00613 529 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 FXNQ16595 210 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 TMEM44Q2T9K0 475 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 CHERPQ8IWX8 916 aaKnown RBP18.06■□□□□ 0.48
COL6A2-208ENST00000485591 CLIP4Q8N3C7 705 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 GALNT11Q8NCW6 608 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 RASSF5Q8WWW0 418 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 ZBTB8AQ96BR9 441 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 SLC7A6OSQ96CW6 309 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-208ENST00000485591 PACSIN3Q9UKS6 424 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 SVILO95425 2214 aa18.06■□□□□ 0.48
COL6A2-208ENST00000485591 DNAJC13O75165 2243 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 A0A1B0GTH9 108 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 SYT5O00445 386 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 FAAHO00519 579 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 TPST1O60507 370 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 ADAM11O75078 769 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 ATP5HO75947 161 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 EPPINO95925 133 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 IFNA14P01570 189 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 ZNF17P17021 662 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 GGT1P19440 569 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 PGCP20142 388 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 CD247P20963 164 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 KDELR2P33947 212 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 GCKP35557 465 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 KCNJ5P48544 419 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 GFRA1P56159 465 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 B3GALT5-AS1P59052 145 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 CEACAM7Q14002 265 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 GLIPR1L2Q4G1C9 344 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 DNAL1Q4LDG9 190 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 NHSL2Q5HYW2 709 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 ZNF550Q7Z398 422 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 COMTD1Q86VU5 262 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 SMYD1Q8NB12 490 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 SLC26A7Q8TE54 656 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 FIG4Q92562 907 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 EXO5Q9H790 373 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 EVA1AQ9H8M9 152 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.05■□□□□ 0.48
COL6A2-208ENST00000485591 SPRR3Q9UBC9 169 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 RPH3AQ9Y2J0 694 aaPredicted RBP18.05■□□□□ 0.48
COL6A2-208ENST00000485591 CFAP46Q8IYW2 2715 aa18.05■□□□□ 0.48
COL6A2-208ENST00000485591 ZGRF1Q86YA3 2104 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 OR14I1A6ND48 311 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 CFAP73A6NFT4 308 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 ETV2O00321 342 aaPredicted RBP18.04■□□□□ 0.48
COL6A2-208ENST00000485591 C8BP07358 591 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 PRKCAP17252 672 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 TCEA1P23193 301 aaKnown RBP18.04■□□□□ 0.48
COL6A2-208ENST00000485591 CHMP24386 653 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 EPS8Q12929 822 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 QPRTQ15274 297 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 TOMM34Q15785 309 aaPredicted RBP18.04■□□□□ 0.48
COL6A2-208ENST00000485591 DUSP7Q16829 419 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 LRRC23Q53EV4 343 aaPredicted RBP18.04■□□□□ 0.48
COL6A2-208ENST00000485591 RAET1LQ5VY80 246 aa18.04■□□□□ 0.48
COL6A2-208ENST00000485591 FGD2Q7Z6J4 655 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms