RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ACTRT3Q9BYD9 372 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 CXorf56Q9H5V9 222 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 CXorf36Q9H7Y0 433 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 ICAM5Q9UMF0 924 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 JMJD1CQ15652 2540 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 TLN2Q9Y4G6 2542 aa17.13■□□□□ 0.33
COL27A1-205ENST00000485397 TLDC2A0PJX2 215 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 TMEM114B3SHH9 223 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 NPHS1O60500 1241 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 C6orf47O95873 294 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 DDX5P17844 614 aaKnown RBP17.12■□□□□ 0.33
COL27A1-205ENST00000485397 ELK4P28324 431 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 P2RX1P51575 399 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 ATP5J2P56134 94 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 TP53BP2Q13625 1128 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 PTGR1Q14914 329 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 DCST2Q5T1A1 773 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 FCRLAQ7L513 359 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 GABRG1Q8N1C3 465 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 EIF1ADQ8N9N8 165 aaKnown RBP17.12■□□□□ 0.33
COL27A1-205ENST00000485397 LILRB1Q8NHL6 650 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-205ENST00000485397 GPR119Q8TDV5 335 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 CPNE4Q96A23 557 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-205ENST00000485397 PPP3R2Q96LZ3 170 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 C3orf30Q96M34 536 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 C1orf50Q9BV19 199 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 HOXD1Q9GZZ0 328 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 COQ10BQ9H8M1 238 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 TIGARQ9NQ88 270 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 GPATCH2Q9NW75 528 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 KLHL13Q9P2N7 655 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 SLC17A7Q9P2U7 560 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 FAF1Q9UNN5 650 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-205ENST00000485397 LAMP3Q9UQV4 416 aa17.12■□□□□ 0.33
COL27A1-205ENST00000485397 HIVEP2P31629 2446 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ADH6P28332 368 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 MAPK1P28482 360 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 RPL3P39023 403 aaKnown RBP17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ATP12AP54707 1039 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 CAPRIN1Q14444 709 aaKnown RBP17.11■□□□□ 0.33
COL27A1-205ENST00000485397 RNPS1Q15287 305 aaKnown RBP17.11■□□□□ 0.33
COL27A1-205ENST00000485397 SPDYE7PQ495Y7 208 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 XKR7Q5GH72 579 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 SFRP5Q5T4F7 317 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ZCCHC23Q6ZST2 131 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ZNF619Q8N2I2 560 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 KRTCAP2Q8N6L1 136 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ZNF614Q8N883 585 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 BANPQ8N9N5 519 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 OR56A1Q8NGH5 318 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 OR2W6PQ8NHA6 318 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 PSMA8Q8TAA3 256 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 APOPT1Q96IL0 206 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 TACO1Q9BSH4 297 aaKnown RBP17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ANKZF1Q9H8Y5 726 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 ACTL7BQ9Y614 415 aa17.11■□□□□ 0.33
COL27A1-205ENST00000485397 GPC6Q9Y625 555 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-205ENST00000485397 IGHV3-15A0A0B4J1V0 119 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 GJE1A6NN92 205 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 H3BNH8 94 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 GTPBP1O00178 669 aaKnown RBP17.1■□□□□ 0.33
COL27A1-205ENST00000485397 CLOCKO15516 846 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 PRKD3O94806 890 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 ADAP00813 363 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 PRKCAP17252 672 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 ENPP1P22413 925 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 IL32P24001 234 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 ARRB2P32121 409 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 SUMO3P55854 103 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-205ENST00000485397 TNK1Q13470 666 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 TAB1Q15750 504 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 IL23RQ5VWK5 629 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 ZNF527Q8NB42 609 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 ZFP90Q8TF47 636 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 NEUROG1Q92886 237 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 HDHD5Q9BXW7 423 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 EML4Q9HC35 981 aaKnown RBP17.1■□□□□ 0.33
COL27A1-205ENST00000485397 MKS1Q9NXB0 559 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 RNF115Q9Y4L5 304 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 FREM1Q5H8C1 2179 aa17.1■□□□□ 0.33
COL27A1-205ENST00000485397 NUP214P35658 2090 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-205ENST00000485397 A0A1W2PNR3 127 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 NPIPB9F8W1W9 429 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 TMCC2O75069 709 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 SPAG7O75391 227 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 YES1P07947 543 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 RPS4XP62701 263 aaKnown RBP17.09■□□□□ 0.33
COL27A1-205ENST00000485397 PPP2R2BQ00005 443 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 ATP6AP1LQ52LC2 224 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 C6orf136Q5SQH8 315 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 NCMAPQ5T1S8 102 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 ADAM5Q6NVV9 412 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 ATG4DQ86TL0 474 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-205ENST00000485397 OR5D16Q8NGK9 328 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 OR5AK3PQ8NH89 298 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 COQ8BQ96D53 544 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 OR7D2Q96RA2 312 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 MDFIQ99750 246 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms