RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 POLHQ9Y253 713 aa7.56□□□□□ -1.2
SORT1-205ENST00000483508 EXOGQ9Y2C4 368 aaKnown RBP7.56□□□□□ -1.2
SORT1-205ENST00000483508 CAB39Q9Y376 341 aaPredicted RBP7.56□□□□□ -1.2
SORT1-205ENST00000483508 ATG4BQ9Y4P1 393 aa7.56□□□□□ -1.2
SORT1-205ENST00000483508 ARHGEF17Q96PE2 2063 aaPredicted RBP7.56□□□□□ -1.2
SORT1-205ENST00000483508 LRP4O75096 1905 aa7.56□□□□□ -1.2
SORT1-205ENST00000483508 APC2O95996 2303 aa7.56□□□□□ -1.2
SORT1-205ENST00000483508 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 CCDC187A0A096LP49 1063 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 URADA6NGE7 173 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 C4orf51C9J302 202 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 POLR1CO15160 346 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 PGRMC2O15173 223 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 SURF4O15260 269 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 KLF4O43474 513 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 AKAP8O43823 692 aaKnown RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 TNFSF15O95150 251 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 IGHA1P01876 353 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 THBS1P07996 1170 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 GIMD1P0DJR0 217 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ZNF10P21506 573 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 CERS1P27544 350 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 HTR1FP30939 366 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 MC3RP41968 323 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 SLC1A3P43003 542 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 CAPZA2P47755 286 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 CDH11P55287 796 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 RGS8P57771 180 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 KIAA1024LP59773 190 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 YPEL5P62699 121 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 TNFRSF17Q02223 184 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 EIF2B5Q13144 721 aaKnown RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 RIN1Q13671 783 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 LY6DQ14210 128 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ELOCQ15369 112 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ZNF79Q15937 498 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PGGHGQ32M88 737 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 ZNF628Q5EBL2 1059 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 C6orf132Q5T0Z8 1188 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PDZK1Q5T2W1 519 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 AADACL4Q5VUY2 407 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 NXNL2Q5VZ03 156 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 C22orf42Q6IC83 251 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 RPL13AP3Q6NVV1 102 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PAQR6Q6TCH4 344 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ENPP7Q6UWV6 458 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 FAM131AQ6UXB0 335 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 MBOAT2Q6ZWT7 520 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 RD3Q7Z3Z2 195 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 WDR53Q7Z5U6 358 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 BCDIN3DQ7Z5W3 292 aaKnown RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 PAQR7Q86WK9 346 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PEX5LQ8IYB4 626 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 LRRC25Q8N386 305 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 CELF2-AS1Q8N7Q2 184 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 OR8D4Q8NGM9 314 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 OR52P1PQ8NH57 321 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 SLC9A6Q92581 669 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PMM1Q92871 262 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 SLC35B4Q969S0 331 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 SLC22A18Q96BI1 424 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 C1GALT1C1Q96EU7 318 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 GIMAP5Q96F15 307 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 TRMT61AQ96FX7 289 aaKnown RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 SERINC2Q96SA4 455 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 MCHR1Q99705 422 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 GPA33Q99795 319 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 CCDC3Q9BQI4 270 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 YIPF4Q9BSR8 244 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 APOOQ9BUR5 198 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PLA2G12AQ9BZM1 189 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 STRADBQ9C0K7 418 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 FN3KQ9H479 309 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 EGLN3Q9H6Z9 239 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 MTHFD2LQ9H903 347 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 NEK6Q9HC98 313 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ABCB9Q9NP78 766 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 C14orf119Q9NWQ9 140 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 IL20Q9NYY1 176 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 H2AFY2Q9P0M6 372 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 PTGFRNQ9P2B2 879 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 PLEKHB1Q9UF11 243 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 KCNK6Q9Y257 313 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 OR1A2Q9Y585 309 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 ENTPD2Q9Y5L3 495 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 CDH10Q9Y6N8 788 aa7.55□□□□□ -1.2
SORT1-205ENST00000483508 SNRNP200O75643 2136 aaKnown RBP7.55□□□□□ -1.2
SORT1-205ENST00000483508 DMXL2Q8TDJ6 3036 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 LY6G6EA0A0G2JKS1 128 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 A0A1W2PQ09 198 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 A0A1W2PQL4 384 aaPredicted RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 FAM172BPA6NC97 362 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 CCDC182A6NF36 153 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 FABP12A6NFH5 140 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 GLOD5A6NK44 160 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 CPSF4LA6NMK7 179 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 ISM1B1AKI9 464 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms