RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 C17orf107Q6ZR85 190 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 IKBIPQ70UQ0 350 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 C17orf64Q86WR6 236 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 KLHDC8AQ8IYD2 350 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 LRRC56Q8IYG6 542 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 KRT78Q8N1N4 520 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 AMER3Q8N944 861 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ANKRD53Q8N9V6 530 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TM4SF18Q96CE8 201 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 KCTD12Q96CX2 325 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 C20orf85Q9H1P6 137 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 COPS3Q9UNS2 423 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 LINC01565O15544 149 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SPINT1O43278 529 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TBX6O95947 436 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 IGHA1P01876 353 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 GSTM3P21266 225 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TBXA2RP21731 343 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 RAG2P55895 527 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 RPS7P62081 194 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SNTB2Q13425 540 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TANGO2Q6ICL3 276 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SEZ6L2Q6UXD5 910 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ESPNLQ6ZVH7 1005 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SIRT6Q8N6T7 355 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 OR4Q3Q8NH05 313 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 THAP4Q8WY91 577 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 OR5P2Q8WZ92 322 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 PIGKQ92643 395 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ARRDC3Q96B67 414 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ZG16BQ96DA0 208 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 FCRL4Q96PJ5 515 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SAV1Q9H4B6 383 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 PCDHB16Q9NRJ7 776 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 MRPL15Q9P015 296 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 LIPT1Q9Y234 373 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 A0A0B4J203 849 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 A0A0G2JK05 382 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TRABD2BA6NFA1 517 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 L7N2F9 121 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 PLATP00750 562 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TRIM23P36406 574 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 EPHA4P54764 986 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ETFDHQ16134 617 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 KHDRBS2Q5VWX1 349 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 SFRP4Q6FHJ7 346 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 PRSS45Q7RTY3 260 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 OR51G2Q8NGK0 314 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 HERVK_113Q902F9 699 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 TFGQ92734 400 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 RFKQ969G6 155 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 WDR34Q96EX3 536 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 MED9Q9NWA0 146 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 AHSPQ9NZD4 102 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 PFDN2Q9UHV9 154 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ING1Q9UK53 422 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 MAFFQ9ULX9 164 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 ICKQ9UPZ9 632 aa13.3□□□□□ -0.28
COL9A2-207ENST00000482722 EXOGQ9Y2C4 368 aaKnown RBP13.3□□□□□ -0.28
COL9A2-207ENST00000482722 KIF26AQ9ULI4 1882 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PLSCR5A0PG75 271 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 TSPAN11A1L157 253 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 SOCS6O14544 535 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PDCD5O14737 125 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 GALP22466 123 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 ATP5A1P25705 553 aaKnown RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 CBX5P45973 191 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 GPR4P46093 362 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 TAS2R41P59536 307 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PIP5KL1Q5T9C9 394 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 CNOT9Q92600 299 aaKnown RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 UBE2E3Q969T4 207 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 RAD51AP1Q96B01 352 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 WDR89Q96FK6 387 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 FAM83CQ9BQN1 747 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 KLHL1Q9NR64 748 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 ZCCHC3Q9NUD5 404 aaKnown RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 SLC23A2Q9UGH3 650 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 GMEB2Q9UKD1 530 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 TBC1D3BA6NDS4 549 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 LATO43561 262 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 OR1F1O43749 312 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PEX14O75381 377 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 WDPCPO95876 746 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 RB1P06400 928 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 E2F1Q01094 437 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 ZNF169Q14929 603 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 ARL9Q6T311 187 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 DGLUCYQ7Z3D6 616 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms