RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 STAC2Q6ZMT1 411 aa16.58■□□□□ 0.24
CLK1-211ENST00000481641 MTERF4Q7Z6M4 381 aaKnown RBP16.58■□□□□ 0.24
CLK1-211ENST00000481641 GPR119Q8TDV5 335 aa16.58■□□□□ 0.24
CLK1-211ENST00000481641 TMEM109Q9BVC6 243 aa16.58■□□□□ 0.24
CLK1-211ENST00000481641 C20orf27Q9GZN8 174 aa16.58■□□□□ 0.24
CLK1-211ENST00000481641 HOXD1Q9GZZ0 328 aa16.58■□□□□ 0.24
CLK1-211ENST00000481641 PAQR5Q9NXK6 330 aaPredicted RBP16.58■□□□□ 0.24
CLK1-211ENST00000481641 ICAM5Q9UMF0 924 aa16.58■□□□□ 0.24
CLK1-211ENST00000481641 DSCAMO60469 2012 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 NPIPB9F8W1W9 429 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 ZNF195O14628 629 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 HOXB4P17483 251 aaPredicted RBP16.57■□□□□ 0.24
CLK1-211ENST00000481641 AGTR1P30556 359 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 CLDN8P56748 225 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 ZNF844Q08AG5 666 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 ACKR1Q16570 336 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 TMEM176BQ3YBM2 270 aaPredicted RBP16.57■□□□□ 0.24
CLK1-211ENST00000481641 PDSS1Q5T2R2 415 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 Q71RC1 249 aaPredicted RBP16.57■□□□□ 0.24
CLK1-211ENST00000481641 NATD1Q8N6N6 113 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 ZNF527Q8NB42 609 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 ABHD3Q8WU67 409 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 SDF2Q99470 211 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 AKTIPQ9H8T0 292 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 DTNAQ9Y4J8 743 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 FREM1Q5H8C1 2179 aa16.57■□□□□ 0.24
CLK1-211ENST00000481641 CENPVL1A0A0U1RR11 272 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 H3BNH8 94 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 KLF4O43474 513 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 TUBBP07437 444 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 KRT16P08779 473 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 FOSL1P15407 271 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 MATN1P21941 496 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 EIF1P41567 113 aaKnown RBP16.56■□□□□ 0.24
CLK1-211ENST00000481641 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
CLK1-211ENST00000481641 MAD2L1Q13257 205 aaPredicted RBP16.56■□□□□ 0.24
CLK1-211ENST00000481641 ZNF239Q16600 458 aaKnown RBP16.56■□□□□ 0.24
CLK1-211ENST00000481641 PDZK1Q5T2W1 519 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 NUFIP2Q7Z417 695 aaKnown RBP16.56■□□□□ 0.24
CLK1-211ENST00000481641 C6orf120Q7Z4R8 191 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 MOAP1Q96BY2 351 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 NOP53Q9NZM5 478 aaKnown RBP16.56■□□□□ 0.24
CLK1-211ENST00000481641 KCNE5Q9UJ90 142 aa16.56■□□□□ 0.24
CLK1-211ENST00000481641 RAI1Q7Z5J4 1906 aaPredicted RBP16.55■□□□□ 0.24
CLK1-211ENST00000481641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.55■□□□□ 0.24
CLK1-211ENST00000481641 RGS16O15492 202 aaPredicted RBP16.55■□□□□ 0.24
CLK1-211ENST00000481641 FCMRO60667 390 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 SMPD2O60906 423 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 PLAUP00749 431 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 SERPINE1P05121 402 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 NID1P14543 1247 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 PRKCAP17252 672 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 ELK4P28324 431 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 CCR4P51679 360 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 C21orf58P58505 322 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 TSC22D1Q15714 1073 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 GPR68Q15743 365 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 ALKBH2Q6NS38 261 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 ANKRD46Q86W74 232 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 WFDC8Q8IUA0 241 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 P3H2Q8IVL5 708 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 TUSC5Q8IXB3 177 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 MREGQ8N565 214 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 TMCO5AQ8N6Q1 288 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 SLC35G5Q96KT7 338 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 SORT1Q99523 831 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 CCL19Q99731 98 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 PARD6BQ9BYG5 372 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 COQ10BQ9H8M1 238 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 GLRX2Q9NS18 164 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 ASIC5Q9NY37 505 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 ACTL7BQ9Y614 415 aa16.55■□□□□ 0.24
CLK1-211ENST00000481641 GPC6Q9Y625 555 aaPredicted RBP16.55■□□□□ 0.24
CLK1-211ENST00000481641 IGHV3-15A0A0B4J1V0 119 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 RNF103-CHMP3A0A140T963 221 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 A0A1W2PNR3 127 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 ESPNB1AK53 854 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 CYP7B1O75881 506 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 CPSF4O95639 269 aaKnown RBP16.54■□□□□ 0.24
CLK1-211ENST00000481641 ADH6P28332 368 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 SUMO3P55854 103 aaPredicted RBP16.54■□□□□ 0.24
CLK1-211ENST00000481641 PHC1P78364 1004 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 MPP2Q14168 576 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 QPRTQ15274 297 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 Q5PR19 223 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 SHEQ5VZ18 495 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 BEND4Q6ZU67 534 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 OR4A15Q8NGL6 344 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 RNF128Q8TEB7 428 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 REXO5Q96IC2 774 aaKnown RBP16.54■□□□□ 0.24
CLK1-211ENST00000481641 C18orf12Q96KH6 178 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 ACTR6Q9GZN1 396 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 CENPHQ9H3R5 247 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 MKLN1Q9UL63 735 aa16.54■□□□□ 0.24
CLK1-211ENST00000481641 SERINC4A6NH21 518 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 ZNF264O43296 627 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 SCN2BO60939 215 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 UBL4AP11441 157 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 FPR1P21462 350 aa16.53■□□□□ 0.24
CLK1-211ENST00000481641 BGNP21810 368 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms