RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 TP63Q9H3D4 680 aaPredicted RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 KAT8Q9H7Z6 458 aaKnown RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 HHATLQ9HCP6 504 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 GID8Q9NWU2 228 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 SUCOQ9UBS9 1254 aaKnown RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 DSPPQ9NZW4 1301 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 UTP20O75691 2785 aaKnown RBP18.4■□□□□ 0.54
CTSA-206ENST00000480961 A0A087WZY1 265 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 H0YC42 278 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 H3BML4 177 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 FAM107AO95990 144 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 LINGO3P0C6S8 592 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 POU3F2P20265 443 aaPredicted RBP18.4■□□□□ 0.54
CTSA-206ENST00000480961 IL11P20809 199 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 CHMP24386 653 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 ACVR2AP27037 513 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 TPD52P55327 224 aaPredicted RBP18.4■□□□□ 0.54
CTSA-206ENST00000480961 TMEM44Q2T9K0 475 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 REEP3Q6NUK4 255 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 PLXDC2Q6UX71 529 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 RPTNQ6XPR3 784 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 ZNF836Q6ZNA1 936 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 UBQLNLQ8IYU4 475 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 MARVELD2Q8N4S9 558 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 TOR1AIP2Q8NFQ8 470 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 BBS10Q8TAM1 723 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 RNF145Q96MT1 663 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 PIGQQ9BRB3 760 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 TMEM38AQ9H6F2 299 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 BCL2L10Q9HD36 194 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 USP22Q9UPT9 525 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 ZNF443Q9Y2A4 671 aaPredicted RBP18.4■□□□□ 0.54
CTSA-206ENST00000480961 SLC35A3Q9Y2D2 325 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 HIVEP3Q5T1R4 2406 aa18.4■□□□□ 0.54
CTSA-206ENST00000480961 FIGNL2A6NMB9 653 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 E9PLN8 166 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 ADAM11O75078 769 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 LDLRP01130 860 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 NID1P14543 1247 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 SLC6A2P23975 617 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 CPA2P48052 419 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 ADORA2A-AS1P86434 159 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 PMPCAQ10713 525 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 FOXF1Q12946 379 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 QPRTQ15274 297 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 GLYR1Q49A26 553 aaPredicted RBP18.39■□□□□ 0.53
CTSA-206ENST00000480961 MRPL2Q5T653 305 aaKnown RBP18.39■□□□□ 0.53
CTSA-206ENST00000480961 ENPP6Q6UWR7 440 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 ZZZ3Q8IYH5 903 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 CLIP4Q8N3C7 705 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 GTPBP8Q8N3Z3 284 aaPredicted RBP18.39■□□□□ 0.53
CTSA-206ENST00000480961 FAM71CQ8NEG0 241 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 FBXO27Q8NI29 283 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 PMM1Q92871 262 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 LRRC37BQ96QE4 947 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 DMRTA2Q96SC8 542 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 VKORC1Q9BQB6 163 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 RSPO3Q9BXY4 272 aaPredicted RBP18.39■□□□□ 0.53
CTSA-206ENST00000480961 PRDM14Q9GZV8 571 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 TMEM185BQ9H7F4 350 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 DNAJB12Q9NXW2 375 aaKnown RBP18.39■□□□□ 0.53
CTSA-206ENST00000480961 FAM215AQ9Y5M1 114 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 MED12Q93074 2177 aa18.39■□□□□ 0.53
CTSA-206ENST00000480961 H0Y3Z8 333 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 AP3D1O14617 1153 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 SEC14L5O43304 696 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 NPPAP01160 153 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 GZMMP51124 257 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 SUMO3P55854 103 aaPredicted RBP18.38■□□□□ 0.53
CTSA-206ENST00000480961 CLDN18P56856 261 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 CLDN20P56880 219 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 EEF1A1P68104 462 aaKnown RBP18.38■□□□□ 0.53
CTSA-206ENST00000480961 CBFBQ13951 182 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 LIN52Q52LA3 116 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 ZNF311Q5JNZ3 666 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 C1orf185Q5T7R7 199 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 GKAP1Q5VSY0 366 aaPredicted RBP18.38■□□□□ 0.53
CTSA-206ENST00000480961 ATP6V1C2Q8NEY4 427 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 OR8J3Q8NGG0 315 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 SSC4DQ8WTU2 575 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 OIT3Q8WWZ8 545 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 ZBTB8AQ96BR9 441 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 CMTM5Q96DZ9 223 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 SH3GL1Q99961 368 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 ECSITQ9BQ95 431 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 TUBA1CQ9BQE3 449 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 EFCAB1Q9HAE3 211 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 ARL8BQ9NVJ2 186 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 GMPR2Q9P2T1 348 aaKnown RBP18.38■□□□□ 0.53
CTSA-206ENST00000480961 ZNF232Q9UNY5 417 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 CHST2Q9Y4C5 530 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 BAHCC1Q9P281 2608 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 DNAJC13O75165 2243 aa18.38■□□□□ 0.53
CTSA-206ENST00000480961 CCT8L1PA6NM43 557 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 WDR1O75083 606 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 DCTN3O75935 186 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 GKN3PP0CG01 181 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 GLI4P10075 376 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 PEPDP12955 493 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 CPN1P15169 458 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms