RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 WDR91A4D1P6 747 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ESPNB1AK53 854 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 B4DXG7 233 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ETV2O00321 342 aaPredicted RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 HDAC3O15379 428 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ARHGEF9O43307 516 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 IDO1P14902 403 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 CRYGSP22914 178 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 PSMA4P25789 261 aaKnown RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 ARRB2P32121 409 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 CHI3L1P36222 383 aaPredicted RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 SLC6A8P48029 635 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 CSNK2A1P68400 391 aaPredicted RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 ZNF141Q15928 474 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ZNF239Q16600 458 aaKnown RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 ZSWIM7Q19AV6 140 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 DEFB113Q30KQ7 82 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 SLC25A53Q5H9E4 307 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 CCNJQ5T5M9 372 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 VWA1Q6PCB0 445 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 C6orf120Q7Z4R8 191 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 BTLAQ7Z6A9 289 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 CMIPQ8IY22 773 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ZNF614Q8N883 585 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 GATSQ8NAP1 163 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 RNF128Q8TEB7 428 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ZFP90Q8TF47 636 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 ZHX1-C8orf76Q96EF9 292 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 SDF2Q99470 211 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 PIP5K1AQ99755 562 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 PAIP2Q9BPZ3 127 aaKnown RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 CACYBPQ9HB71 228 aaKnown RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 CCM2LQ9NUG4 571 aaPredicted RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 THUMPD1Q9NXG2 353 aaKnown RBP10.27□□□□□ -0.77
CCM2-213ENST00000480658 KLHL9Q9P2J3 617 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 BTNL2Q9UIR0 455 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 GPR52Q9Y2T5 361 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 DOCK7Q96N67 2140 aa10.27□□□□□ -0.77
CCM2-213ENST00000480658 SERINC4A6NH21 518 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 FAM171A2A8MVW0 826 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 NPIPB9F8W1W9 429 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 TNFSF11O14788 317 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 DNPH1O43598 174 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 GMFGO60234 142 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 KIAA0513O60268 411 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 PRKD3O94806 890 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 ATE1O95260 518 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CSTAP01040 98 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CGAP01215 116 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 IL6P05231 212 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CD99P14209 185 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CREB1P16220 341 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 PRKCAP17252 672 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 S100A3P33764 101 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 HTR3AP46098 478 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CCR4P51679 360 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 RAC3P60763 192 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 SIRPAP78324 504 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 IRX1P78414 480 aaPredicted RBP10.26□□□□□ -0.77
CCM2-213ENST00000480658 FOXF1Q12946 379 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 SNTB1Q13884 538 aaKnown RBP10.26□□□□□ -0.77
CCM2-213ENST00000480658 CD226Q15762 336 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CTU2Q2VPK5 515 aaKnown RBP10.26□□□□□ -0.77
CCM2-213ENST00000480658 BEX5Q5H9J7 111 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 AP1ARQ63HQ0 302 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 OR4F3Q6IEY1 312 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 HEPHL1Q6MZM0 1159 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 TGIF2LYQ8IUE0 185 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 LRRC75A-AS1Q8N1F1 130 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 STEAP2Q8NFT2 490 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 OR5M1Q8NGP8 315 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 OR5AK3PQ8NH89 298 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 NEURL3Q96EH8 262 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 CCDC115Q96NT0 180 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 PANX1Q96RD7 426 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 NUF2Q9BZD4 464 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 LAT2Q9GZY6 243 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 OPN3Q9H1Y3 402 aaPredicted RBP10.26□□□□□ -0.77
CCM2-213ENST00000480658 PLEKHF2Q9H8W4 249 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 EXOSC3Q9NQT5 275 aaKnown RBP10.26□□□□□ -0.77
CCM2-213ENST00000480658 EMC3Q9P0I2 261 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 KLHL13Q9P2N7 655 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 GIMAP2Q9UG22 337 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCM2-213ENST00000480658 CARD8Q9Y2G2 431 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 PLEKHA6Q9Y2H5 1048 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 WDR45Q9Y484 360 aa10.26□□□□□ -0.77
CCM2-213ENST00000480658 V9GYY5 206 aaPredicted RBP10.26□□□□□ -0.77
CCM2-213ENST00000480658 TMEM120BA0PK00 339 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 TMEM247A6NEH6 219 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 C17orf51A8MQB3 221 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 ZNF195O14628 629 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 CXCL13O43927 109 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 DNAJA2O60884 412 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 CNOT4O95628 575 aaKnown RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 KRT75O95678 551 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 PSMB1P20618 241 aaKnown RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 EFNA1P20827 205 aaPredicted RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 BGNP21810 368 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms