RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 A0A1B0GWA3 101 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 C4orf47A7E2U8 309 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 KLF4O43474 513 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 TLX2O43763 284 aaPredicted RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 ADAM11O75078 769 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 TIAF1O95411 115 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 CCNA2P20248 432 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 ST13P50502 369 aaKnown RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 TBCEQ15813 527 aaPredicted RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 SNAPC1Q16533 368 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 PHF19Q5T6S3 580 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 SYT6Q5T7P8 510 aaPredicted RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 UBE2UQ5VVX9 321 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 AP1ARQ63HQ0 302 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 LANCL3Q6ZV70 420 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 RABEPKQ7Z6M1 372 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 CADM2Q8N3J6 435 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 ZSCAN1Q8NBB4 408 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 ZNF721Q8TF20 911 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 NUDT9Q9BW91 350 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 TSSK6Q9BXA6 273 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 POLDIP3Q9BY77 421 aaKnown RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 DPH1Q9BZG8 443 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 NXF5Q9H1B4 397 aaKnown RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 SLC22A11Q9NSA0 550 aa13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 CNOT2Q9NZN8 540 aaKnown RBP13.42□□□□□ -0.26
PKNOX1-206ENST00000480179 SEC16AO15027 2179 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 SYNDIG1LA6NDD5 238 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 SERINC4A6NH21 518 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 UNC119BA6NIH7 251 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 ARHGAP33O14559 1287 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 CDC42EP2O14613 210 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 CSTAP01040 98 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 ADRA2AP08913 450 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 IFI30P13284 250 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 HOXD12P35452 270 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 RHBDD2Q6NTF9 364 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 ZNF613Q6PF04 617 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 ZNF620Q6ZNG0 422 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 GRAMD2AQ8IUY3 354 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 PRR22Q8IZ63 422 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 GATSQ8NAP1 163 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 OR4C3Q8NH37 302 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 OR14A16Q8NHC5 309 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 ZFAND2BQ8WV99 257 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 TRUB1Q8WWH5 349 aaKnown RBP13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 FCGR1BQ92637 280 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 OSTF1Q92882 214 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 YIPF6Q96EC8 236 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 TRIM2Q9C040 744 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 EVA1AQ9H8M9 152 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 TMEM9BQ9NQ34 198 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 RARRES3Q9UL19 164 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.41□□□□□ -0.262e-7■■■■□ 25.5
PKNOX1-206ENST00000480179 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
PKNOX1-206ENST00000480179 A0A0B4J2E0 115 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 A0A1B0GX12 115 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 LNP1A1A4G5 178 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 POLR1CO15160 346 aaPredicted RBP13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 SCRG1O75711 98 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 PTHP01270 115 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 IGKV3-11P04433 115 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 FUT1P19526 365 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 ACAA2P42765 397 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 PPICP45877 212 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 ROR2Q01974 943 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 ZNF91Q05481 1191 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 SYT14P1Q58G82 188 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 PWWP2BQ6NUJ5 590 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 SLC30A6Q6NXT4 461 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 ZNF550Q7Z398 422 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 ANKRD13BQ86YJ7 626 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 SLC38A9Q8NBW4 561 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 OR4Q3Q8NH05 313 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 FANK1Q8TC84 345 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 LRR1Q96L50 414 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 NRSN2Q9GZP1 204 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 ATP13A2Q9NQ11 1180 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 C20orf141Q9NUB4 165 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 CFL2Q9Y281 166 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 GPR52Q9Y2T5 361 aa13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 MAP1BP46821 2468 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-206ENST00000480179 KMT2BQ9UMN6 2715 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 GNB5O14775 395 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 CHP2O43745 196 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 CH25HO95992 272 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 ADORA3P0DMS8 318 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 PIPP12273 146 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 CKMT1AP12532 417 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 MAKP20794 623 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 SLC15A1P46059 708 aa13.39□□□□□ -0.27
PKNOX1-206ENST00000480179 NFATC3Q12968 1075 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms