RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GPC6Q9Y625 555 aaPredicted RBP14.2□□□□□ -0.14
DDX56-210ENST00000479440 PMF1-BGLAPU3KQ54 211 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 ESYT3A0FGR9 886 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 ZNF195O14628 629 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 KCNK2O95069 426 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 PGM3O95394 542 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 HSPA4LO95757 839 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 NUDT14O95848 222 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 ENO1P06733 434 aaKnown RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 INHBAP08476 426 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 TAC1P20366 129 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 CD40P25942 277 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 SUMO3P55854 103 aaPredicted RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 GNG11P61952 73 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 GUCY2DQ02846 1103 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 IMPG1Q17R60 797 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 PRSS53Q2L4Q9 553 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 TMEM176BQ3YBM2 270 aaPredicted RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 SPDYAQ5MJ70 313 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 UBAP2Q5T6F2 1119 aaKnown RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 SZRD1Q7Z422 152 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 MTERF4Q7Z6M4 381 aaKnown RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 ZFP28Q8NHY6 868 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 FBXO27Q8NI29 283 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 FAM110BQ8TC76 370 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 MSI2Q96DH6 328 aaKnown RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 MS4A4EQ96PG1 132 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 INPP5KQ9BT40 448 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 PLA2G12AQ9BZM1 189 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 WBP11Q9Y2W2 641 aaKnown RBP14.19□□□□□ -0.14
DDX56-210ENST00000479440 PRR14LQ5THK1 2151 aa14.19□□□□□ -0.14
DDX56-210ENST00000479440 IGHV3-15A0A0B4J1V0 119 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 PDPK1O15530 556 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 RAD51DO75771 328 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 ENPP1P22413 925 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 MAP3K8P41279 467 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 SERPINB4P48594 390 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 SERPINB9P50453 376 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 ZNF83P51522 516 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 PRKAG1P54619 331 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 RAC3P60763 192 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 ZNF117Q03924 483 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 RASGEF1BQ0VAM2 473 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 CD226Q15762 336 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 ZNF678Q5SXM1 525 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 B3GLCTQ6Y288 498 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 ZNF100Q8IYN0 542 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 ATP6V1C2Q8NEY4 427 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 FAM76AQ8TAV0 307 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 FBXO30Q8TB52 745 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 TMEM237Q96Q45 408 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 KLHDC3Q9BQ90 382 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 TRMOQ9BU70 441 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 C12orf65Q9H3J6 166 aaKnown RBP14.18□□□□□ -0.14
DDX56-210ENST00000479440 ACSS3Q9H6R3 686 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 PCNX3Q9H6A9 2034 aa14.18□□□□□ -0.14
DDX56-210ENST00000479440 CIB4A0PJX0 185 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 SERTM1A2A2V5 107 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZNF724A8MTY0 619 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 VWC2LB2RUY7 222 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 M0R1B8 84 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 CYTIPO60759 359 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ACP2P11117 423 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 NR4A2P43354 598 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 P2RX1P51575 399 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 PKNOX1P55347 436 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 LCP2Q13094 533 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 UNC50Q53HI1 259 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 TEX35Q5T0J7 233 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 C3orf33Q6P1S2 294 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZDHHC24Q6UX98 284 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZNF551Q7Z340 670 aaPredicted RBP14.17□□□□□ -0.14
DDX56-210ENST00000479440 GALNT5Q7Z7M9 940 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZAR1Q86SH2 424 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZNF433Q8N7K0 673 aaPredicted RBP14.17□□□□□ -0.14
DDX56-210ENST00000479440 COX18Q8N8Q8 333 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZNF527Q8NB42 609 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 SPATA4Q8NEY3 305 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 NUP43Q8NFH3 380 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 OR52N5Q8NH56 324 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 PHOSPHO1Q8TCT1 267 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ARL8AQ96BM9 186 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ZNF300Q96RE9 604 aaPredicted RBP14.17□□□□□ -0.14
DDX56-210ENST00000479440 PRR14Q9BWN1 585 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 FKRPQ9H9S5 495 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 MYOZ1Q9NP98 299 aaPredicted RBP14.17□□□□□ -0.14
DDX56-210ENST00000479440 EMC3Q9P0I2 261 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 ING1Q9UK53 422 aaPredicted RBP14.17□□□□□ -0.14
DDX56-210ENST00000479440 POLR3HQ9Y535 204 aaPredicted RBP14.17□□□□□ -0.14
DDX56-210ENST00000479440 ACTL7BQ9Y614 415 aa14.17□□□□□ -0.14
DDX56-210ENST00000479440 H3BNH8 94 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 ALOX5P09917 674 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 C2orf54Q08AI8 447 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 CR1LQ2VPA4 569 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 UBE2J2Q8N2K1 259 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.16□□□□□ -0.14
DDX56-210ENST00000479440 JADE3Q92613 823 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 C3orf49Q96BT1 292 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 ZMYND19Q96E35 227 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms