RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CSRP2Q16527 193 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 ZNF805Q5CZA5 627 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 UBXN11Q5T124 520 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 TNFAIP8L2Q6P589 184 aaPredicted RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 UBE2R2Q712K3 238 aaPredicted RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 LRRTM4Q86VH4 590 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 TMEM185BQ9H7F4 350 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 C1orf196B1AJZ1 125 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 ACTL6AO96019 429 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 IGHA1P01876 353 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 PTHLHP12272 177 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 HOXD9P28356 352 aaPredicted RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 IRF8Q02556 426 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 COMTD1Q86VU5 262 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 LSRQ86X29 649 aaPredicted RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 TMEM86AQ8N2M4 240 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 OR13C5Q8NGS8 318 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 GOT1L1Q8NHS2 421 aaPredicted RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 A4GNTQ9UNA3 340 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 MOKQ9UQ07 419 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 CARHSP1Q9Y2V2 147 aaKnown RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 PPP2R3BQ9Y5P8 575 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 PYCARD-AS1I3L0S3 204 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 TBX18O95935 607 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 NDUFB7P17568 137 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 RNF144AP50876 292 aaPredicted RBP19.78■□□□□ 0.76
SDF4-206ENST00000478938 ARHGAP1Q07960 439 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 EFEMP1Q12805 493 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 OR51G2Q8NGK0 314 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 TMEM40Q8WWA1 233 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 IL17CQ9P0M4 197 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 ZNF8P17098 575 aaPredicted RBP19.78■□□□□ 0.76
SDF4-206ENST00000478938 MAPK3P27361 379 aaPredicted RBP19.78■□□□□ 0.76
SDF4-206ENST00000478938 PCSK1P29120 753 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 NFATC2Q13469 925 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 SDHAF4Q5VUM1 108 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 SLC38A5Q8WUX1 472 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 GAL3ST1Q99999 423 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 PAAF1Q9BRP4 392 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 ASB8Q9H765 288 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 COL4A5P29400 1685 aa19.78■□□□□ 0.76
SDF4-206ENST00000478938 ARGFXA6NJG6 315 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 SOCS6O14544 535 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 GPR32O75388 356 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 SC5DO75845 299 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 NTN1O95631 604 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 IL5P05113 134 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 HEXAP06865 529 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 DCTDP32321 178 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 ADH7P40394 386 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 SLC6A12P48065 614 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 CCINQ13939 588 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 RPE65Q16518 533 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 RAB12Q6IQ22 244 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 SSX9Q7RTT3 188 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 LGALS14Q8TCE9 139 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 ZBED3Q96IU2 234 aaPredicted RBP19.77■□□□□ 0.76
SDF4-206ENST00000478938 PINK1Q9BXM7 581 aa19.77■□□□□ 0.76
SDF4-206ENST00000478938 UBE2QL1A1L167 161 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 CTDSPLO15194 276 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 ZDHHC11BP0C7U3 371 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 PNLIPRP2P54317 469 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 PRSS53Q2L4Q9 553 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 BEX5Q5H9J7 111 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 CDC73Q6P1J9 531 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 C11orf88Q6PI97 169 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 CD300LDQ6UXZ3 194 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 HMGN2P46Q86SG4 172 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 CMTM4Q8IZR5 234 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 OR2AK2Q8NG84 335 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 OR5D16Q8NGK9 328 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 TMEM19Q96HH6 336 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 LRIG1Q96JA1 1093 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 BHLHE41Q9C0J9 482 aaPredicted RBP19.77■□□□□ 0.75
SDF4-206ENST00000478938 MAN2C1Q9NTJ4 1040 aa19.77■□□□□ 0.75
SDF4-206ENST00000478938 ZNF106Q9H2Y7 1883 aaKnown RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 TMEM272A0A1B0GTI8 110 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 GAPDHSO14556 408 aaPredicted RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 LAG3P18627 525 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 ABCD3P28288 659 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 ACTR1BP42025 376 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 PTSQ03393 145 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 RBM39Q14498 530 aaKnown RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 C10orf91Q5T1B1 145 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 AADACL4Q5VUY2 407 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 TAPT1Q6NXT6 567 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 NUDT18Q6ZVK8 323 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 ABHD4Q8TB40 342 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 RAB8BQ92930 207 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 TRIM43Q96BQ3 446 aaPredicted RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 TRMT61BQ9BVS5 477 aaKnown RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 FNDC11Q9BVV2 318 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 ZC3H12DA2A288 527 aaKnown RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 PCDH8O95206 1070 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 SLC2A10O95528 541 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 FOLR2P14207 255 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 ABOP16442 354 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 CSNK1DP48730 415 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 GPR15P49685 360 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 RELQ04864 619 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms