RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PINK1Q9BXM7 581 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 DSN1Q9H410 356 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 DNAJB12Q9NXW2 375 aaKnown RBP13.95□□□□□ -0.18
SEC13-215ENST00000477547 MED11Q9P086 117 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 DKKL1Q9UK85 242 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 FBXL2Q9UKC9 423 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 SLC13A4Q9UKG4 626 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 ZNF232Q9UNY5 417 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 SHANK1Q9Y566 2161 aa13.95□□□□□ -0.18
SEC13-215ENST00000477547 CDHR4A6H8M9 788 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 EIF4E2O60573 245 aaKnown RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 GLSO94925 669 aaPredicted RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 NUDT14O95848 222 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 IFNA14P01570 189 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 CRYABP02511 175 aaKnown RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 ME2P23368 584 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 KDELR2P33947 212 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 ADH7P40394 386 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 MAGEA5P43359 124 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 SUMO3P55854 103 aaPredicted RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 PPIAP62937 165 aaKnown RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 FOXK1P85037 733 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 TOMM20Q15388 145 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 CYBRD1Q53TN4 286 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 CBLN3Q6UW01 205 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 ULK2Q8IYT8 1036 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 FAM109AQ8N4B1 249 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 BHLHE22Q8NFJ8 381 aaPredicted RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 RASSF5Q8WWW0 418 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 CNOT9Q92600 299 aaKnown RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 ARSGQ96EG1 525 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 RNF145Q96MT1 663 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 GNRHR2Q96P88 292 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 PCDHAC1Q9H158 963 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 TSPAN10Q9H1Z9 355 aaPredicted RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 MUC13Q9H3R2 512 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 PTGES2Q9H7Z7 377 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 EXOSC3Q9NQT5 275 aaKnown RBP13.94□□□□□ -0.18
SEC13-215ENST00000477547 RLIMQ9NVW2 624 aa13.94□□□□□ -0.18
SEC13-215ENST00000477547 KIAA1549Q9HCM3 1950 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 GSC2O15499 205 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 FRS3O43559 492 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 TPST1O60507 370 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ZNF682O95780 498 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 SERPINA1P01009 418 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 RFPL3SP0C7P2 107 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 CD247P20963 164 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ATP6V1B2P21281 511 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 TCEA1P23193 301 aaKnown RBP13.93□□□□□ -0.18
SEC13-215ENST00000477547 MSX1P28360 303 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 P2RX1P51575 399 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ZNF41P51814 821 aaPredicted RBP13.93□□□□□ -0.18
SEC13-215ENST00000477547 ALDH6A1Q02252 535 aaKnown RBP13.93□□□□□ -0.18
SEC13-215ENST00000477547 GANABQ14697 944 aaKnown RBP13.93□□□□□ -0.18
SEC13-215ENST00000477547 ZSWIM7Q19AV6 140 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 HYAL4Q2M3T9 481 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 GLIPR1L2Q4G1C9 344 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 RNFT1Q5M7Z0 435 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 GLYATQ6IB77 296 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 COMTD1Q86VU5 262 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 CLIP4Q8N3C7 705 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 CISD2Q8N5K1 135 aaKnown RBP13.93□□□□□ -0.18
SEC13-215ENST00000477547 TOR1AIP2Q8NFQ8 470 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 GPR32P1Q8NGA4 272 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ASB9Q96DX5 294 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 LAT2Q9GZY6 243 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 UBQLN3Q9H347 655 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ADPRHL2Q9NX46 363 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 KLHL28Q9NXS3 571 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ICAM5Q9UMF0 924 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 NTNG1Q9Y2I2 539 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 CHST2Q9Y4C5 530 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 TEP1Q99973 2627 aaKnown RBP13.93□□□□□ -0.18
SEC13-215ENST00000477547 MED12Q93074 2177 aa13.93□□□□□ -0.18
SEC13-215ENST00000477547 ANKUB1A6NFN9 424 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 TTLL8A6PVC2 850 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 FAM47E-STBD1D6RA91 191 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 SYT5O00445 386 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 CDC40O60508 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC13-215ENST00000477547 CBR3O75828 277 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 KCNJ5P48544 419 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 RGS8P57771 180 aaPredicted RBP13.92□□□□□ -0.18
SEC13-215ENST00000477547 CBFBQ13951 182 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 ASRGL1Q7L266 308 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 GRAMD2AQ8IUY3 354 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 ZNF440Q8IYI8 595 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 OR5W2Q8NH69 310 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 PROX1Q92786 737 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 C1GALT1C1Q96EU7 318 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 TPD52L3Q96J77 140 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 NSMCE2Q96MF7 247 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 RSPO3Q9BXY4 272 aaPredicted RBP13.92□□□□□ -0.18
SEC13-215ENST00000477547 OLAHQ9NV23 265 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 QPCTLQ9NXS2 382 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 BAG5Q9UL15 447 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms