RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 OR2D3Q8NGH3 330 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR52B4Q8NGK2 314 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR10T2Q8NGX3 314 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR2L8Q8NGY9 312 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SPPL2AQ8TCT8 520 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GPX8Q8TED1 209 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 AGAP11Q8TF27 550 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PYROXD1Q8WU10 500 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SELENOMQ8WWX9 145 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ARNTL2Q8WYA1 636 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 C22orf15Q8WYQ4 148 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 HSD17B8Q92506 261 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TMBIM1Q969X1 311 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ELP4Q96EB1 424 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SGTBQ96EQ0 304 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 DTD2Q96FN9 168 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 MRPL48Q96GC5 212 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 MBOAT7Q96N66 472 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RILPQ96NA2 401 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 PPP1R2P1Q96PQ5 205 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 NPY6RQ99463 290 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CDCA3Q99618 268 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 GPA33Q99795 319 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 P2RY13Q9BPV8 354 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 APOL2Q9BQE5 337 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RTP3Q9BQQ7 232 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZNF251Q9BRH9 671 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TMEM246Q9BRR3 403 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZNF416Q9BWM5 594 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZNF717Q9BY31 904 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 GSDMCQ9BYG8 508 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TKTL2Q9H0I9 626 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RAB1BQ9H0U4 201 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 POLR3FQ9H1D9 316 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 S1PR5Q9H228 398 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SPNS1Q9H2V7 528 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR51M1Q9H341 326 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GOLPH3Q9H4A6 298 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 DPEP2Q9H4A9 486 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 NARFLQ9H6Q4 476 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TMEM185BQ9H7F4 350 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CNOT10Q9H9A5 744 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 SIAEQ9HAT2 523 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SEBOXQ9HB31 216 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZBTB20Q9HC78 741 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 MCCC2Q9HCC0 563 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GPN1Q9HCN4 374 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 KCNMB3Q9NPA1 279 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CHRAC1Q9NRG0 131 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 GSN-AS1Q9NRJ2 163 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RGS18Q9NS28 235 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ABCC13Q9NSE7 274 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 DNAJC17Q9NVM6 304 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 C2orf42Q9NWW7 574 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TAS2R1Q9NYW7 299 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 NLGN3Q9NZ94 848 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 STOX2Q9P2F5 926 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 SLC17A7Q9P2U7 560 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ONECUT1Q9UBC0 465 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 BCAP29Q9UHQ4 241 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CRLS1Q9UJA2 301 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 C3orf18Q9UK00 162 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 FBXL2Q9UKC9 423 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 MKLN1Q9UL63 735 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TBC1D24Q9ULP9 559 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 TP53TG5Q9Y2B4 290 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RBMX2Q9Y388 322 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 GRIP1Q9Y3R0 1128 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 MMACHCQ9Y4U1 282 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 KCNE2Q9Y6J6 123 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 VPS8Q8N3P4 1428 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 RIMS2Q9UQ26 1411 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 KTN1Q86UP2 1357 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 LMTK2Q8IWU2 1503 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 UMODL1Q5DID0 1318 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TCOF1Q13428 1488 aaKnown RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 IGLV7-46A0A075B6I9 117 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 EDDM13A0A1B0GTR0 161 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 FAM237BA0A1B0GVD1 139 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 FAM240BA0A1B0GVZ2 78 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 A0A1W2PPI3 338 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 A0A1W2PPQ1 181 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 C9orf170A2RU37 121 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 ANKDD1BA6NHY2 528 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 CDRT15L2A8MXV6 281 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TEX22C9J3V5 150 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 E9PAM4 449 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 PRAMEF26H0Y7S4 382 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TMEM178BH3BS89 294 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 CCRL2O00421 344 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 TCAPO15273 167 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 PAPSS1O43252 624 aaPredicted RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 PRKYO43930 277 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 HS6ST1O60243 411 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 NME2P1O60361 137 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 GMDSO60547 372 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 PRAMEF11O60813 436 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 CCDC22O60826 627 aa2.21□□□□□ -2.06
XRN1-211ENST00000477237 WBP4O75554 376 aaKnown RBP2.21□□□□□ -2.06
XRN1-211ENST00000477237 PRKRAO75569 313 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms