RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 OR10A4Q9H209 315 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 UBQLN3Q9H347 655 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 PCDHB16Q9NRJ7 776 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 IL20RAQ9UHF4 553 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 TBX21Q9UL17 535 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 WASH3PC4AMC7 463 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 PDCD5O14737 125 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 FRS3O43559 492 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 STX11O75558 287 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 ABLIM3O94929 683 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
CCM2-207ENST00000475551 EIF2B5Q13144 721 aaKnown RBP16.5■□□□□ 0.23
CCM2-207ENST00000475551 ZNF169Q14929 603 aaPredicted RBP16.5■□□□□ 0.23
CCM2-207ENST00000475551 GPNMBQ14956 572 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 TMEM64Q6YI46 380 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 ESPNLQ6ZVH7 1005 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 Q6ZVU0 165 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 HTR3DQ70Z44 454 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 NUDT13Q86X67 352 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 ANKRD53Q8N9V6 530 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 C17orf47Q8NEP4 570 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 CNOT9Q92600 299 aaKnown RBP16.5■□□□□ 0.23
CCM2-207ENST00000475551 KAT2AQ92830 837 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 KLK6Q92876 244 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 MTG2Q9H4K7 406 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 FBXL3Q9UKT7 428 aa16.5■□□□□ 0.23
CCM2-207ENST00000475551 ZC3H12DA2A288 527 aaKnown RBP16.49■□□□□ 0.23
CCM2-207ENST00000475551 NUPL2O15504 423 aaKnown RBP16.49■□□□□ 0.23
CCM2-207ENST00000475551 ZNF749O43361 778 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 SUSD5O60279 629 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 RP2O75695 350 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 S100A11P31949 105 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 TTLQ8NG68 377 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 OR10H4Q8NGA5 316 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 ZFPM2Q8WW38 1151 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 KISS1RQ969F8 398 aaPredicted RBP16.49■□□□□ 0.23
CCM2-207ENST00000475551 ELP4Q96EB1 424 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 YIPF4Q9BSR8 244 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 MFRPQ9BY79 579 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 TTYH1Q9H313 450 aaPredicted RBP16.49■□□□□ 0.23
CCM2-207ENST00000475551 CA10Q9NS85 328 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 ZMIZ1Q9ULJ6 1067 aa16.49■□□□□ 0.23
CCM2-207ENST00000475551 KLF2Q9Y5W3 355 aaPredicted RBP16.49■□□□□ 0.23
CCM2-207ENST00000475551 A0A0B4J203 849 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 CCDC85CA6NKD9 419 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PCP4L1A6NKN8 68 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 MID1O15344 667 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 LDOC1O95751 146 aaPredicted RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 HOXB3P14651 431 aaPredicted RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 GJA1P17302 382 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PRKAG1P54619 331 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 NRG3P56975 720 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PSMA6P60900 246 aaKnown RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 STK11Q15831 433 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 ETFDHQ16134 617 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 SFRP5Q5T4F7 317 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 DMKNQ6E0U4 476 aaPredicted RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 MTFR2Q6P444 385 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 MCCC2Q9HCC0 563 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 RCE1Q9Y256 329 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PRELID3BQ9Y3B1 194 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PRR23D1E9PI22 279 aaPredicted RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 GRM6O15303 877 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PRR23D2P0DMB1 279 aaPredicted RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 ITGB8P26012 769 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 CAPZA2P47755 286 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 AP3S2P59780 193 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 LASP1Q14847 261 aaKnown RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 CLVS2Q5SYC1 327 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PRPF38BQ5VTL8 546 aaKnown RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 ALKAL2Q6UX46 152 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 VRK2Q86Y07 508 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 SFXN5Q8TD22 340 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 BRIX1Q8TDN6 353 aaKnown RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 TRIM43Q96BQ3 446 aaPredicted RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 SEC22CQ9BRL7 303 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 ATPIF1Q9UII2 106 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 ADAM29Q9UKF5 820 aa16.48■□□□□ 0.23
CCM2-207ENST00000475551 PCDHGA9Q9Y5G4 932 aaKnown RBP16.48■□□□□ 0.23
CCM2-207ENST00000475551 HMSDA8MTL9 139 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 ARPC1BO15143 372 aaKnown RBP16.47■□□□□ 0.23
CCM2-207ENST00000475551 PIP5K1CO60331 668 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 PPP3CBP16298 524 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 RAD52P43351 418 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 ARFIP1P53367 373 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 TMEM255AQ5JRV8 349 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 UBE2NLQ5JXB2 153 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 MEIOBQ8N635 442 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 CLRN3Q8NCR9 226 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 OR2A12Q8NGT7 310 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 C4orf36Q96KX1 117 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 C1QTNF2Q9BXJ5 285 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 MED20Q9H944 212 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 SLC35C2Q9NQQ7 365 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 TAS2R5Q9NYW4 299 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 MTCL1Q9Y4B5 1905 aaKnown RBP16.47■□□□□ 0.23
CCM2-207ENST00000475551 TCRBV16S1A1N1A0A5B0 115 aa16.47■□□□□ 0.23
CCM2-207ENST00000475551 ANKRD61A6NGH8 418 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms