RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ZNF426Q9BUY5 554 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 RGCCQ9H4X1 137 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 AUNIPQ9H7T9 357 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 NHEJ1Q9H9Q4 299 aaPredicted RBP4.53□□□□□ -1.68
NPHP3-206ENST00000474871 MSL2Q9HCI7 577 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 PXMP2Q9NR77 195 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 C14orf119Q9NWQ9 140 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 GSKIPQ9P0R6 139 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 NAGPAQ9UK23 515 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 PADI2Q9Y2J8 665 aa4.53□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM184BQ9Y519 407 aaPredicted RBP4.53□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 EPHB6O15197 1021 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 UBDO15205 165 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PLIN3O60664 434 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 TBX19O60806 448 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 EDF1O60869 148 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 OR2B3O76000 313 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 TOMM40O96008 361 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FTH1P02794 183 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 KITP10721 976 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FDXRP22570 491 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CCND3P30281 292 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 RPS6P62753 249 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CCL7P80098 99 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SMAD3P84022 425 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 VGLL4Q14135 290 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 AKIRIN2Q53H80 203 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SLC35F1Q5T1Q4 408 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 HIST2H2AA3Q6FI13 130 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 INO80CQ6PI98 192 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 HSD17B13Q7Z5P4 300 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GPX8Q8TED1 209 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ABHD3Q8WU67 409 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF296Q8WUU4 475 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 RNF138Q8WVD3 245 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SMPDL3BQ92485 455 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 KCNJ9Q92806 393 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 OSTF1Q92882 214 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 DAZLQ92904 295 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 HHIPQ96QV1 700 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ALKBH7Q9BT30 221 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FNDC11Q9BVV2 318 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PTGES2Q9H7Z7 377 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 HMG20AQ9NP66 347 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 OSER1Q9NX31 292 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MTCH1Q9NZJ7 389 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ADA2Q9NZK5 511 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ADM5C9JUS6 153 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 AIPO00170 330 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 WNT9AO14904 365 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PIAS1O75925 651 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 METTL18O95568 372 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ABHD2P08910 425 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 UBA1P22314 1058 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GRK4P32298 578 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 VIPR2P41587 438 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 KLK7P49862 253 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 POU4F1Q01851 419 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MXD1Q05195 221 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ANKRD54Q6NXT1 300 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 DLK2Q6UY11 383 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CHST9Q7L1S5 443 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF280BQ86YH2 543 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ATPAF2Q8N5M1 289 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 HSD17B11Q8NBQ5 300 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CPNE2Q96FN4 548 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 POM121L2Q96KW2 1035 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 YPEL4Q96NS1 127 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SLC5A7Q9GZV3 580 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF350Q9GZX5 532 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 TMPRSS5Q9H3S3 457 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MYNNQ9NPC7 610 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF225Q9UK10 706 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FBXW2Q9UKT8 454 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF214Q9UL59 606 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF490Q9ULM2 529 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 U3KQV3 271 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CROCCQ5TZA2 2017 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 A0A1W2PQJ5 194 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 NPIPB15A6NHN6 443 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 KIAA1324LA8MWY0 1029 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FAM227AF5H4B4 570 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 F5H5T6 163 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 IMPA2O14732 288 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SLC28A2O43868 658 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SEC24AO95486 1093 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 IFNA21P01568 189 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CD8BP10966 210 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 IRF2P14316 349 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SERPINA2P20848 420 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GABRR1P24046 479 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GUCA1AP43080 201 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CTSOP43234 321 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GCLMP48507 274 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MRPL19P49406 292 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 EGR4Q05215 589 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 IL18R1Q13478 541 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms