RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 NPIPB9F8W1W9 429 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 RNASET2O00584 256 aaKnown RBP18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF195O14628 629 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 TM9SF1O15321 606 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 EIF4E2O60573 245 aaKnown RBP18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 SFTPDP35247 375 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 NKX6-1P78426 367 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 PDCD2Q16342 344 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 ACKR1Q16570 336 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 KRTAP21-3Q3LHN1 58 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 CBLN3Q6UW01 205 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 C20orf204Q6ZNR8 217 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 CXorf67Q86X51 503 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 LRRC75A-AS1Q8N1F1 130 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF614Q8N883 585 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 WFDC11Q8NEX6 87 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 TOR1AIP2Q8NFQ8 470 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 OR5AK3PQ8NH89 298 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 FBXO27Q8NI29 283 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 GPR119Q8TDV5 335 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 NUDT8Q8WV74 236 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 MARK4Q96L34 752 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 MRGPRX4Q96LA9 322 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 NMUR2Q9GZQ4 415 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 OR10A4Q9H209 315 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 GP6Q9HCN6 339 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 RAP2CQ9Y3L5 183 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 KCNE3Q9Y6H6 103 aa18.2■□□□□ 0.5
PDLIM4-206ENST00000474421 NPIPA5A0A0B4J1W7 369 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 WDR91A4D1P6 747 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 NPIPA7E9PJI5 369 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF264O43296 627 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 DSCAMO60469 2012 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 SMPD2O60906 423 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 NPIPA8P0DM63 369 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 MATN1P21941 496 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 AGTR1P30556 359 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF844Q08AG5 666 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 CBFBQ13951 182 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF239Q16600 458 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 BEX5Q5H9J7 111 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 TMEM201Q5SNT2 666 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 ANKRD34AQ69YU3 496 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 STAC2Q6ZMT1 411 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 C6orf120Q7Z4R8 191 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF781Q8N8C0 355 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 VPS37AQ8NEZ2 397 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 OR8J2Q8NGG1 315 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 OR5D16Q8NGK9 328 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 OR5W2Q8NH69 310 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 RNF128Q8TEB7 428 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 SDF2Q99470 211 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 KLHDC3Q9BQ90 382 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 DPY30Q9C005 99 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 AKTIPQ9H8T0 292 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 UBTD1Q9HAC8 227 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 GPR52Q9Y2T5 361 aa18.19■□□□□ 0.5
PDLIM4-206ENST00000474421 HEATR5AQ86XA9 2040 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 RNF103-CHMP3A0A140T963 221 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 OIP5O43482 229 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 ITM2AO43736 263 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 STX11O75558 287 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 AGR2O95994 175 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 UBL4AP11441 157 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 PRKCAP17252 672 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 RPL14P50914 215 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 NR1H2P55055 460 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 SELENBP1Q13228 472 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 ANXA8L1Q5VT79 327 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 OR4F3Q6IEY1 312 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 BIVMQ86UB2 503 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 P3H2Q8IVL5 708 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 LRRC34Q8IZ02 419 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 TMCO5AQ8N6Q1 288 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 ARSGQ96EG1 525 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 SLC35G5Q96KT7 338 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 CCL19Q99731 98 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 TACO1Q9BSH4 297 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF395Q9H8N7 513 aaPredicted RBP18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 EXD2Q9NVH0 621 aa18.18■□□□□ 0.5
PDLIM4-206ENST00000474421 PSMB1P20618 241 aaKnown RBP18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 SHC1P29353 583 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 SLC1A6P48664 564 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF141Q15928 474 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 ARHGAP11BQ3KRB8 267 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 TMEM176BQ3YBM2 270 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 SLC25A53Q5H9E4 307 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 PDZK1Q5T2W1 519 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 C16orf62Q7Z3J2 963 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 CROCCP2Q86T23 111 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 CLECL1Q8IZS7 167 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 SLC43A2Q8N370 569 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 OR4A15Q8NGL6 344 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 ZFP90Q8TF47 636 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 OIT3Q8WWZ8 545 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 ROBO4Q8WZ75 1007 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 PPP1R36Q96LQ0 422 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 HDHD5Q9BXW7 423 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 C12orf49Q9H741 205 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms