RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 GOLGA8NF8WBI6 632 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 GOLGA8RI6L899 631 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 AKAP10O43572 662 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 LMX1BO60663 402 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 PGM3O95394 542 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 H6PDO95479 791 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 ME2P23368 584 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 ZNF83P51522 516 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 PRKAA2P54646 552 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 LCP2Q13094 533 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 NRF1Q16656 503 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 AGAP6Q5VW22 663 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 CYB5R2Q6BCY4 276 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 TDRPQ86YL5 185 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 C17orf53Q8N3J3 647 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-209ENST00000473421 ZNF433Q8N7K0 673 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-209ENST00000473421 OR52N5Q8NH56 324 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 CLHC1Q8NHS4 586 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 GPR119Q8TDV5 335 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 CPNE4Q96A23 557 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-209ENST00000473421 DNAJA3Q96EY1 480 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 SOX7Q9BT81 388 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 SHCBP1LQ9BZQ2 653 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 BCO1Q9HAY6 547 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 UBQLN4Q9NRR5 601 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 CBLN4Q9NTU7 201 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 NTMQ9P121 344 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 BAIAP2L1Q9UHR4 511 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 CARD8Q9Y2G2 431 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 OR5H1A6NKK0 313 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 ESPNB1AK53 854 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 SLITRK5O94991 958 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 ENO1P06733 434 aaKnown RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 PRKCAP17252 672 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 COX5AP20674 150 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 CHRNEQ04844 493 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 KLHL26Q53HC5 615 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 PDSS1Q5T2R2 415 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 OLIG3Q7RTU3 272 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 SZRD1Q7Z422 152 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 TRIM46Q7Z4K8 759 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 CDRT4Q8N9R6 151 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 OR2T11Q8NH01 316 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 PHOSPHO1Q8TCT1 267 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 ZFP90Q8TF47 636 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 FAM168AQ92567 244 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 CDS1Q92903 461 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 MSI2Q96DH6 328 aaKnown RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 L3HYPDHQ96EM0 354 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 REXO5Q96IC2 774 aaKnown RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 ADAD1Q96M93 576 aaKnown RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 QRSL1Q9H0R6 528 aaKnown RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 HEATR1Q9H583 2144 aaKnown RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 C3orf14Q9HBI5 128 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 SIRT3Q9NTG7 399 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-209ENST00000473421 EMCNQ9ULC0 261 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 SNX8Q9Y5X2 465 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 TENM1Q9UKZ4 2725 aa11.1□□□□□ -0.63
TRAF4-209ENST00000473421 NUP214P35658 2090 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-209ENST00000473421 A0A1W2PQD3 144 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 VWC2LB2RUY7 222 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 PDPK1O15530 556 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 RGS14O43566 566 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 RAD51DO75771 328 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
TRAF4-209ENST00000473421 SRD5A1P18405 259 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 GGT1P19440 569 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 USF1P22415 310 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-209ENST00000473421 ATP5F1P24539 256 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-209ENST00000473421 CD40P25942 277 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 ECHS1P30084 290 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 GPC1P35052 558 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 PHBP35232 272 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 GSTM5P46439 218 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 SERPINB9P50453 376 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 PKNOX1P55347 436 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■■□□ 18.3
TRAF4-209ENST00000473421 RASGEF1BQ0VAM2 473 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 RAB35Q15286 201 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 MST1LQ2TV78 715 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 TIMM23BQ5SRD1 257 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 MUC15Q8N387 334 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 MMGT1Q8N4V1 131 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 MRGPRX4Q96LA9 322 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 EML4Q9HC35 981 aaKnown RBP11.09□□□□□ -0.63
TRAF4-209ENST00000473421 GP6Q9HCN6 339 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 ZNF180Q9UJW8 692 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 SLC25A15Q9Y619 301 aa11.09□□□□□ -0.63
TRAF4-209ENST00000473421 IGHV4-61A0A0C4DH41 118 aa11.08□□□□□ -0.64
TRAF4-209ENST00000473421 CENPVL1A0A0U1RR11 272 aa11.08□□□□□ -0.64
TRAF4-209ENST00000473421 G3V2L1 256 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms