RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 ELOVL5Q9NYP7 299 aa14.9□□□□□ -0.02
USP40-212ENST00000473191 NOP53Q9NZM5 478 aaKnown RBP14.9□□□□□ -0.02
USP40-212ENST00000473191 IGHV3-15A0A0B4J1V0 119 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 C9JVG2 144 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 NUDT14O95848 222 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 PRKCAP17252 672 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 HOXC12P31275 282 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 P2RX1P51575 399 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 ATP12AP54707 1039 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 GPR68Q15743 365 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 STAC2Q6ZMT1 411 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 CHDHQ8NE62 594 aaPredicted RBP14.89□□□□□ -0.03
USP40-212ENST00000473191 OR6K3Q8NGY3 331 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 PRPF18Q99633 342 aaKnown RBP14.89□□□□□ -0.03
USP40-212ENST00000473191 RAB21Q9UL25 225 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 MKLN1Q9UL63 735 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 RAP2CQ9Y3L5 183 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 DTNAQ9Y4J8 743 aa14.89□□□□□ -0.03
USP40-212ENST00000473191 RNF103-CHMP3A0A140T963 221 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 A0A1W2PNR3 127 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 ZNF195O14628 629 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 BIRC5O15392 142 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 UGT2B17O75795 530 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 GOSR1O95249 250 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 PLGP00747 810 aaPredicted RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 ALDOCP09972 364 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 FCGR2AP12318 317 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 DDX5P17844 614 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 AGTR1P30556 359 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 PCYT1AP49585 367 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 RPL14P50914 215 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 NME5P56597 212 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 CARD18P57730 90 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 PPP2R2AP63151 447 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 FUT5Q11128 374 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 TSC22D1Q15714 1073 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 MAPK14Q16539 360 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 ZNF239Q16600 458 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 TMEM176BQ3YBM2 270 aaPredicted RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 SPANXN4Q5MJ08 99 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 NUFIP2Q7Z417 695 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 MTERF4Q7Z6M4 381 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 OR4A15Q8NGL6 344 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 RAB8BQ92930 207 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 SLC39A3Q9BRY0 314 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 QRSL1Q9H0R6 528 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 OR51I1Q9H343 314 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 UBTD1Q9HAC8 227 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 SSU72Q9NP77 194 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 KCNK9Q9NPC2 374 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 MCTS1Q9ULC4 181 aaKnown RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 EMC9Q9Y3B6 208 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 HEATR5AQ86XA9 2040 aa14.88□□□□□ -0.03
USP40-212ENST00000473191 RAI1Q7Z5J4 1906 aaPredicted RBP14.88□□□□□ -0.03
USP40-212ENST00000473191 PRAMEF27A3QJZ7 478 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 GTPBP1O00178 669 aaKnown RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 RNASET2O00584 256 aaKnown RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 ZNF500O60304 480 aaPredicted RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 SYNGR4O95473 234 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 CPSF4O95639 269 aaKnown RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 PLAUP00749 431 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 OR12D1P0DN82 309 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 ENPP1P22413 925 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 EDNRAP25101 427 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 CTBP2P56545 445 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 WDR4P57081 412 aaKnown RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 PLAURQ03405 335 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 BST1Q10588 318 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 MAD2L1Q13257 205 aaPredicted RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 QPRTQ15274 297 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 TNFAIP8L2Q6P589 184 aaPredicted RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 HOMEZQ8IX15 550 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 TUSC5Q8IXB3 177 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 NATD1Q8N6N6 113 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 TMCO5AQ8N6Q1 288 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 ANKRD42Q8N9B4 389 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 OR8J2Q8NGG1 315 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 RNF128Q8TEB7 428 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 MOAP1Q96BY2 351 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 ZG16BQ96DA0 208 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 SLC35G5Q96KT7 338 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 PAIP2Q9BPZ3 127 aaKnown RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 DPY30Q9C005 99 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 HOXD1Q9GZZ0 328 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 ZNF226Q9NYT6 803 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 HAO1Q9UJM8 370 aa14.87□□□□□ -0.03
USP40-212ENST00000473191 ING1Q9UK53 422 aaPredicted RBP14.87□□□□□ -0.03
USP40-212ENST00000473191 SERINC4A6NH21 518 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 TM9SF1O15321 606 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 ZNF264O43296 627 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 KLF4O43474 513 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 CYP7B1O75881 506 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 TUBBP07437 444 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 MYZAPP0CAP1 466 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 UBL4AP11441 157 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 ME2P23368 584 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 IL12AP29459 219 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 CCR4P51679 360 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 UFM1P61960 85 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 STX3Q13277 289 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms