RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ALDH3B2P48448 385 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 KCNK10P57789 538 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 TSPAN5P62079 268 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 KDSRQ06136 332 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 IL24Q13007 206 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 ZMYND11Q15326 602 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 ATAD3BQ5T9A4 648 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 RIPPLY2Q5TAB7 128 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 TMEM53Q6P2H8 277 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 KDM7AQ6ZMT4 941 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 RBM43Q6ZSC3 357 aaKnown RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 ARMCX2Q7L311 632 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 TMCO2Q7Z6W1 182 aaPredicted RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 STX12Q86Y82 276 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 ZNF679Q8IYX0 411 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 SYCE1Q8N0S2 351 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 LINC00518Q8N0U6 118 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 PYROXD2Q8N2H3 581 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 TCAIMQ8N3R3 496 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 EIF1ADQ8N9N8 165 aaKnown RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 BBS1Q8NFJ9 593 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 ENKURQ8TC29 256 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 MR1Q95460 341 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 SLC25A38Q96DW6 304 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 RTBDNQ9BSG5 229 aaPredicted RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 DPH7Q9BTV6 452 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 C9orf16Q9BUW7 83 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 MLPHQ9BV36 600 aaPredicted RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 UPF3BQ9BZI7 483 aaKnown RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 POLR1EQ9GZS1 481 aaKnown RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 SLC5A7Q9GZV3 580 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 OPN3Q9H1Y3 402 aaPredicted RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 CENPHQ9H3R5 247 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 COQ10BQ9H8M1 238 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 ABCB8Q9NUT2 735 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 SOHLH2Q9NX45 425 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 IL37Q9NZH6 218 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 ATP6V1HQ9UI12 483 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 LEF1Q9UJU2 399 aaPredicted RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 MRTO4Q9UKD2 239 aaKnown RBP2.78□□□□□ -1.96
CD46-213ENST00000471987 SNX6Q9UNH7 406 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 STX8Q9UNK0 236 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 NUDCQ9Y266 331 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 SLC9A8Q9Y2E8 581 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 TIMM22Q9Y584 194 aa2.78□□□□□ -1.96
CD46-213ENST00000471987 PTPRGP23470 1445 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 C1orf232A0A0U1RR37 186 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 GOLGA6L10A6NI86 522 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 DFNA5O60443 496 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 CBR3O75828 277 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 OAS1P00973 400 aaKnown RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 HLA-DRAP01903 254 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 GLAP06280 429 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 RALBP11234 206 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 NCF1P14598 390 aaPredicted RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 ETS1P14921 441 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 CCND2P30279 289 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 FRKP42685 505 aaPredicted RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 MAGEA1P43355 309 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ACADSBP45954 432 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 HSPA13P48723 471 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 METAP1P53582 386 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 STX1BP61266 288 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 VBP1P61758 197 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ZNF33BQ06732 778 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 PTK6Q13882 451 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 GAMTQ14353 236 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 CASP8Q14790 479 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 RPS6KA1Q15418 735 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 SHHQ15465 462 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 CD226Q15762 336 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 CHRNA6Q15825 494 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ANKRD20A4Q4UJ75 823 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 SBK1Q52WX2 424 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ANKRD20A8PQ5CZ79 823 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ANKRD20A2Q5SQ80 823 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ANKRD20A1Q5TYW2 823 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ANKRD20A3Q5VUR7 823 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 PTRHD1Q6GMV3 140 aaKnown RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 DEGS2Q6QHC5 323 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 AFTPHQ6ULP2 937 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 TPGS1Q6ZTW0 290 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 PRSS48Q7RTY5 328 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 TMEM179BQ7Z7N9 219 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 SYCP3Q8IZU3 236 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 OR6M1Q8NGM8 313 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 KIR2DL5BQ8NHK3 375 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 RFESDQ8TAC1 157 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 FAM81AQ8TBF8 368 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ZNF721Q8TF20 911 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 DNAJA4Q8WW22 397 aaPredicted RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 MRPL38Q96DV4 380 aaKnown RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 CHMP6Q96FZ7 201 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ZNF560Q96MR9 790 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 SECISBP2Q96T21 854 aaKnown RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 CCT7Q99832 543 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 CARD6Q9BX69 1037 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 GPR61Q9BZJ8 451 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 EXO5Q9H790 373 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 TMEM206Q9H813 350 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms