RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TIGARQ9NQ88 270 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 NOP53Q9NZM5 478 aaKnown RBP20.14■□□□□ 0.81
C9orf3-213ENST00000471978 DTNAQ9Y4J8 743 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 ACTL7BQ9Y614 415 aa20.14■□□□□ 0.81
C9orf3-213ENST00000471978 WDR91A4D1P6 747 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 NPIPB9F8W1W9 429 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF195O14628 629 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 EFNA2O43921 213 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 TUBBP07437 444 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 PABPC4LP0CB38 370 aaKnown RBP20.13■□□□□ 0.81
C9orf3-213ENST00000471978 LOXP28300 417 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-213ENST00000471978 AGTR1P30556 359 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 CLDN8P56748 225 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 C21orf58P58505 322 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 NDUFAF6Q330K2 333 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 WDR93Q6P2C0 686 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 BIVMQ86UB2 503 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 P3H2Q8IVL5 708 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 LRRC75A-AS1Q8N1F1 130 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 GPR119Q8TDV5 335 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 C18orf12Q96KH6 178 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 PPP1R36Q96LQ0 422 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 C12orf49Q9H741 205 aa20.13■□□□□ 0.81
C9orf3-213ENST00000471978 GPC6Q9Y625 555 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-213ENST00000471978 NUP214P35658 2090 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-213ENST00000471978 GJE1A6NN92 205 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 ITM2AO43736 263 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 HOXB4P17483 251 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 RPS26P62854 115 aaKnown RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 TOMM34Q15785 309 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 PDCD2Q16342 344 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF239Q16600 458 aaKnown RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 Q5PR19 223 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 C20orf204Q6ZNR8 217 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 RFWD2Q8NHY2 731 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 CPNE4Q96A23 557 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 SDF2Q99470 211 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 SRXN1Q9BYN0 137 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF395Q9H8N7 513 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-213ENST00000471978 ASIC5Q9NY37 505 aa20.12■□□□□ 0.81
C9orf3-213ENST00000471978 KLF4O43474 513 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 PRKCAP17252 672 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 MATN1P21941 496 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 RNPS1Q15287 305 aaKnown RBP20.11■□□□□ 0.81
C9orf3-213ENST00000471978 CHI3L2Q15782 390 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 SMU1Q2TAY7 513 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 KRT71Q3SY84 523 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 TMEM176BQ3YBM2 270 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-213ENST00000471978 BEX5Q5H9J7 111 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 OR4F3Q6IEY1 312 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 C6orf120Q7Z4R8 191 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 CLECL1Q8IZS7 167 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 CLEC4FQ8N1N0 589 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 TMCO5AQ8N6Q1 288 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF781Q8N8C0 355 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 ATP6V1C2Q8NEY4 427 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 RNF128Q8TEB7 428 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 ABHD3Q8WU67 409 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 ZIM3Q96PE6 472 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 SMR3AQ99954 134 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 ACTR6Q9GZN1 396 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 AKTIPQ9H8T0 292 aa20.11■□□□□ 0.81
C9orf3-213ENST00000471978 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.11■□□□□ 0.81
C9orf3-213ENST00000471978 V9GYY5 206 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-213ENST00000471978 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-213ENST00000471978 DUXAA6NLW8 204 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 RGS16O15492 202 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF264O43296 627 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 SERPINE1P05121 402 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 INHBBP09529 407 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 NID1P14543 1247 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 ADSLP30566 484 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-213ENST00000471978 ABCE1P61221 599 aaKnown RBP20.1■□□□□ 0.81
C9orf3-213ENST00000471978 TMEM201Q5SNT2 666 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 PDZK1Q5T2W1 519 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 MREGQ8N565 214 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 TOR1AIP2Q8NFQ8 470 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 OR5W2Q8NH69 310 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 ZFP90Q8TF47 636 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 MRGPRX4Q96LA9 322 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 SERHL2Q9H4I8 314 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 GPR52Q9Y2T5 361 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 NAV3Q8IVL0 2385 aa20.1■□□□□ 0.81
C9orf3-213ENST00000471978 NSD1Q96L73 2696 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-213ENST00000471978 ARID1AO14497 2285 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 BIRC5O15392 142 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 EIF4E2O60573 245 aaKnown RBP20.09■□□□□ 0.81
C9orf3-213ENST00000471978 MYZAPP0CAP1 466 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 UBL4AP11441 157 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 CCR4P51679 360 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF844Q08AG5 666 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 CBFBQ13951 182 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 GPR68Q15743 365 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 FCRLAQ7L513 359 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 WFDC8Q8IUA0 241 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 TUSC5Q8IXB3 177 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 ZNF524Q96C55 264 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 SLC35G5Q96KT7 338 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 NMUR2Q9GZQ4 415 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 OR10A4Q9H209 315 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms