RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SLC41A3Q96GZ6 507 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 DCBLD2Q96PD2 775 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 ALPK1Q96QP1 1244 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 NODALQ96S42 347 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 RBM4BQ9BQ04 359 aaKnown RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 RBM4Q9BWF3 364 aaKnown RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 ANKRD19PQ9H560 264 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 SACM1LQ9NTJ5 587 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 PDP1Q9P0J1 537 aaPredicted RBP8.94□□□□□ -0.98
CCM2-204ENST00000470837 WIF1Q9Y5W5 379 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 SPEGQ15772 3267 aa8.94□□□□□ -0.98
CCM2-204ENST00000470837 DMXL1Q9Y485 3027 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 EFSO43281 561 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 GMFGO60234 142 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 OR10H3O60404 316 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 PRSS23O95084 383 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 RASAL1O95294 804 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 EPPINO95925 133 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ADRB1P08588 477 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 PNMTP11086 282 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 PRG2P13727 222 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ANXA8P13928 327 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CASP3P42574 277 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 IDH2P48735 452 aaKnown RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 ZNF136P52737 540 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 RAD23AP54725 363 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 UCNP55089 124 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 SOX8P57073 446 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ARG2P78540 354 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 IL1RL1Q01638 556 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ZNF117Q03924 483 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 SRSF6Q13247 344 aaKnown RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 SKP2Q13309 424 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 RAPSNQ13702 412 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CD226Q15762 336 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 NPTX1Q15818 432 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 MICAQ29983 383 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 EXOC3L2Q2M3D2 409 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 COL28A1Q2UY09 1125 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 NDUFAF6Q330K2 333 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ALG10BQ5I7T1 473 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 PRAMEF20Q5VT98 475 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 FNDC7Q5VTL7 733 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ULK3Q6PHR2 472 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 LYPD8Q6UX82 237 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 IZUMO2Q6UXV1 221 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 COMTD1Q86VU5 262 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CDK20Q8IZL9 346 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 GALNT4Q8N4A0 578 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 OR10G2Q8NGC3 310 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 OR4D11Q8NGI4 311 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 MAGEE2Q8TD90 523 aaPredicted RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 PAQR8Q8TEZ7 354 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 TM9SF4Q92544 642 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 MPP4Q96JB8 637 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 JSRP1Q96MG2 331 aaPredicted RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 HS6ST2Q96MM7 605 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCM2-204ENST00000470837 Q9H521 79 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 COQ10BQ9H8M1 238 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CPNE5Q9HCH3 593 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 GALNT9Q9HCQ5 603 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ANKRD10Q9NXR5 420 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 LRFN1Q9P244 771 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 DKK4Q9UBT3 224 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ENOPH1Q9UHY7 261 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 ACAD8Q9UKU7 415 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CNOT11Q9UKZ1 510 aaKnown RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 SLC7A7Q9UM01 511 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 A4GNTQ9UNA3 340 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 WASF3Q9UPY6 502 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CHST2Q9Y4C5 530 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 LYVE1Q9Y5Y7 322 aa8.93□□□□□ -0.98
CCM2-204ENST00000470837 CHCHD2Q9Y6H1 151 aaPredicted RBP8.93□□□□□ -0.98
CCM2-204ENST00000470837 A0A1B0GWA3 101 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 ANKRD33BA6NCL7 494 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 ARRDC5A6NEK1 342 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 ELOA3DA6NLF2 546 aaPredicted RBP8.92□□□□□ -0.98
CCM2-204ENST00000470837 PDLIM1O00151 329 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 EI24O14681 340 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 TLX3O43711 291 aaPredicted RBP8.92□□□□□ -0.98
CCM2-204ENST00000470837 CHP2O43745 196 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 MAN1A2O60476 641 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 ZNF354AO60765 605 aaPredicted RBP8.92□□□□□ -0.98
CCM2-204ENST00000470837 SLC25A12O75746 678 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 HPRP00739 348 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 CD46P15529 392 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 IGFBP5P24593 272 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 ACAA2P42765 397 aaKnown RBP8.92□□□□□ -0.98
CCM2-204ENST00000470837 SLC1A3P43003 542 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 HTR3AP46098 478 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 ALDH3A2P51648 485 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 HMGA2P52926 109 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 IST1P53990 364 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 UGT2B15P54855 530 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 PPP1R8Q12972 351 aaKnown RBP8.92□□□□□ -0.98
CCM2-204ENST00000470837 MFAP5Q13361 173 aa8.92□□□□□ -0.98
CCM2-204ENST00000470837 DAG1Q14118 895 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms