RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 C12orf10Q9HB07 376 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 MED17Q9NVC6 651 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 CNOT2Q9NZN8 540 aaKnown RBP10.12□□□□□ -0.79
SND1-208ENST00000470463 RNF6Q9Y252 685 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 PCDHGB6Q9Y5F9 930 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 GPR179Q6PRD1 2367 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 SPTBP11277 2137 aa10.12□□□□□ -0.79
SND1-208ENST00000470463 SCN2AQ99250 2005 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NPIPA5A0A0B4J1W7 369 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 IRGMA1A4Y4 181 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 EFCAB10A6NFE3 127 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 CLDN24A6NM45 220 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 ALG1L2C9J202 215 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NPIPA7E9PJI5 369 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 CDX4O14627 284 aaPredicted RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 ZNF264O43296 627 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 FRS3O43559 492 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 RGS10O43665 173 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NOL3O60936 208 aaKnown RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 ZFAND5O76080 213 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 UTS2O95399 124 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 HMGN1P05114 100 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 LINGO3P0C6S8 592 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NPIPA8P0DM63 369 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 PIPP12273 146 aaPredicted RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 POU1F1P28069 291 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 ACAA2P42765 397 aaKnown RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 GIPRP48546 466 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NR0B1P51843 470 aaKnown RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 CTBP2P56545 445 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 RNF4P78317 190 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 SLC35A2P78381 396 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 CDK5Q00535 292 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 PRKCDQ05655 676 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 CSRP2Q16527 193 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 ALG10BQ5I7T1 473 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 TMEM201Q5SNT2 666 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 WBP2NLQ6ICG8 309 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 PAPD4Q6PIY7 484 aaKnown RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 ZNF517Q6ZMY9 492 aaPredicted RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 KCTD8Q6ZWB6 473 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 TMPRSS11FQ6ZWK6 438 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 ZAR1Q86SH2 424 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 SATL1Q86VE3 508 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NFAM1Q8NET5 270 aaPredicted RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 OR52L1Q8NGH7 329 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 OR4C3Q8NH37 302 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 C9orf43Q8TAL5 461 aaPredicted RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 ZNF420Q8TAQ5 688 aaPredicted RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 CNOT9Q92600 299 aaKnown RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 TMCO6Q96DC7 493 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 DEPDC7Q96QD5 511 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 POLDIP3Q9BY77 421 aaKnown RBP10.11□□□□□ -0.79
SND1-208ENST00000470463 LAT2Q9GZY6 243 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 APMAPQ9HDC9 416 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 CTPS2Q9NRF8 586 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 IL20Q9NYY1 176 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 BAIAP2Q9UQB8 552 aa10.11□□□□□ -0.79
SND1-208ENST00000470463 NINQ8N4C6 2090 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 LOC102723996A0A087X1L8 192 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 CENPVL1A0A0U1RR11 272 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 A0A1B0GWA3 101 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 CLCA1A8K7I4 914 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 PTGES3LE9PB15 166 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 KLF4O43474 513 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 TSPAN2O60636 221 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 CBFA2T3O75081 653 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 RAB40ALP0C0E4 278 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 JMJD7P0C870 316 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 GKN3PP0CG01 181 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 BMP7P18075 431 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 ITIH1P19827 911 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 ABCD3P28288 659 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 EPHA2P29317 976 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 SLC9A3P48764 834 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 CDH15P55291 814 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 SLC26A5P58743 744 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 NNATQ16517 81 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 OCLNQ16625 522 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 ANKDD1AQ495B1 522 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 FNDC7Q5VTL7 733 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 LANCL3Q6ZV70 420 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 PRICKLE2Q7Z3G6 844 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 MRGPREQ86SM8 312 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 NKAIN4Q8IVV8 208 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 NRMQ8IXM6 262 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 DND1Q8IYX4 353 aaKnown RBP10.1□□□□□ -0.79
SND1-208ENST00000470463 SPARTQ8N0X7 666 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 APCDD1LQ8NCL9 501 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 SLC22A8Q8TCC7 542 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 PHOSPHO1Q8TCT1 267 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 BRIX1Q8TDN6 353 aaKnown RBP10.1□□□□□ -0.79
SND1-208ENST00000470463 TMEM255BQ8WV15 326 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 TTC9Q92623 222 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 MR1Q95460 341 aa10.1□□□□□ -0.79
SND1-208ENST00000470463 EFHD2Q96C19 240 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms