RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 FGD3Q5JSP0 725 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 SWT1Q5T5J6 900 aaKnown RBP13.85□□□□□ -0.19
COL4A5-203ENST00000470339 DESI1Q6ICB0 168 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 ZNF770Q6IQ21 691 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-203ENST00000470339 PODNL1Q6PEZ8 512 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 ATG16L2Q8NAA4 619 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 OR10G2Q8NGC3 310 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 DNAJA4Q8WW22 397 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-203ENST00000470339 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-203ENST00000470339 PSMF1Q92530 271 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 SGCZQ96LD1 299 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 NODALQ96S42 347 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 CCNL2Q96S94 520 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-203ENST00000470339 FEVQ99581 238 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 PRR14Q9BWN1 585 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 Q9H521 79 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 TEKT2Q9UIF3 430 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 TMEFF2Q9UIK5 374 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-203ENST00000470339 MGAT4BQ9UQ53 548 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 PCNX3Q9H6A9 2034 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 IGLV3-32A0A0A0MS00 114 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 A0A0B4J2E0 115 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 A0A1B0GX12 115 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 H0YAE9 185 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 ADAM10O14672 748 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
COL4A5-203ENST00000470339 OR6B1O95007 311 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 LYPD3O95274 346 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 CDH2P19022 906 aaPredicted RBP13.84□□□□□ -0.19
COL4A5-203ENST00000470339 CBLP22681 906 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 MSX1P28360 303 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 IFNGR2P38484 337 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 DAPP51397 102 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 GAS1P54826 345 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 SUMO3P55854 103 aaPredicted RBP13.84□□□□□ -0.19
COL4A5-203ENST00000470339 FOXC1Q12948 553 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 CLN3Q13286 438 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 TAF11Q15544 211 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 ACER2Q5QJU3 275 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 WBP2NLQ6ICG8 309 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 ULK3Q6PHR2 472 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 RNF113BQ8IZP6 322 aaKnown RBP13.84□□□□□ -0.19
COL4A5-203ENST00000470339 OR5W2Q8NH69 310 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 ARSGQ96EG1 525 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 THOC3Q96J01 351 aaKnown RBP13.84□□□□□ -0.19
COL4A5-203ENST00000470339 MPP4Q96JB8 637 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 HS6ST2Q96MM7 605 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 RTN4RQ9BZR6 473 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 LHPPQ9H008 270 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 ZNF556Q9HAH1 456 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 CPNE5Q9HCH3 593 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 CNIH4Q9P003 139 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 KIF17Q9P2E2 1029 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 KLK13Q9UKR3 277 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 ICAM5Q9UMF0 924 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 WASF3Q9UPY6 502 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 CARD8Q9Y2G2 431 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 NTNG1Q9Y2I2 539 aa13.84□□□□□ -0.19
COL4A5-203ENST00000470339 A0A1B0GWA3 101 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 CHP2O43745 196 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 ADAM11O75078 769 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 ADAP00813 363 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 THY1P04216 161 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 PGCP20142 388 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 FUT4P22083 530 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 IGFBP5P24593 272 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 RBM34P42696 430 aaKnown RBP13.83□□□□□ -0.2
COL4A5-203ENST00000470339 RNF144AP50876 292 aaPredicted RBP13.83□□□□□ -0.2
COL4A5-203ENST00000470339 P2RX1P51575 399 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 ZNF117Q03924 483 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 MERTKQ12866 999 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 COX10Q12887 443 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 LAPTM4AQ15012 233 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 SEC23BQ15437 767 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 NDUFAF6Q330K2 333 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 SLC30A6Q6NXT4 461 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 CD300LDQ6UXZ3 194 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 LINC00114Q6XXX2 140 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 RRM2BQ7LG56 351 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 APLFQ8IW19 511 aaPredicted RBP13.83□□□□□ -0.2
COL4A5-203ENST00000470339 DHRSXQ8N5I4 330 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 TMEM156Q8N614 296 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 GATSQ8NAP1 163 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 CLEC1AQ8NC01 280 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 OR10G3Q8NGC4 313 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 OR5M3Q8NGP4 307 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 BRIX1Q8TDN6 353 aaKnown RBP13.83□□□□□ -0.2
COL4A5-203ENST00000470339 DUSP19Q8WTR2 217 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 TFAP2CQ92754 450 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 FGF11Q92914 225 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 NTNG2Q96CW9 530 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 FRMD6Q96NE9 622 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 PRSS27Q9BQR3 290 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 DGCR6LQ9BY27 220 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 C12orf10Q9HB07 376 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 SH2D2AQ9NP31 389 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 CTPS2Q9NRF8 586 aa13.83□□□□□ -0.2
COL4A5-203ENST00000470339 KRT84Q9NSB2 600 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms