RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ETV2O00321 342 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 TLX3O43711 291 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 BCAS1O75363 584 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 E2F6O75461 281 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 LYPD3O95274 346 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ANGPTL1O95841 491 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 IGF2P01344 180 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 PRG2P13727 222 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 UQCRBP14927 111 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ZNF23P17027 643 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 SOX3P41225 446 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 CASP3P42574 277 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 HSPA13P48723 471 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 HLCSP50747 726 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 FBXW4P57775 412 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 TRAM2Q15035 370 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 OR1Q1Q15612 314 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 COL28A1Q2UY09 1125 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 RFX4Q33E94 735 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 KDM4DQ6B0I6 523 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ZNF770Q6IQ21 691 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 CD300LDQ6UXZ3 194 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 STK32CQ86UX6 486 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 TSPYL5Q86VY4 417 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ICA1LQ8NDH6 482 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 VANGL1Q8TAA9 524 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 PHOSPHO1Q8TCT1 267 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ADAMTS16Q8TE57 1224 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ASB15Q8WXK1 588 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 THOC3Q96J01 351 aaKnown RBP11.66□□□□□ -0.54
TRAF4-208ENST00000469529 HS6ST2Q96MM7 605 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ALPK1Q96QP1 1244 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 ADAM19Q9H013 955 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 RNF32Q9H0A6 362 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 STMN3Q9NZ72 180 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 TMCC3Q9ULS5 477 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 TESMINQ9Y4I5 508 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 FREM2Q5SZK8 3169 aa11.66□□□□□ -0.54
TRAF4-208ENST00000469529 SH3PXD2BA1X283 911 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SOCS2O14508 198 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 NKX2-8O15522 239 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 ADAM11O75078 769 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 OR6B1O95007 311 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SNX4O95219 450 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 THY1P04216 161 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 LINGO3P0C6S8 592 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 ELAVL4P26378 380 aaKnown RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 HTR2AP28223 471 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 EIF2S3P41091 472 aaKnown RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 PTGDSP41222 190 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 RBM34P42696 430 aaKnown RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 YAP1P46937 504 aaKnown RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 P2RX1P51575 399 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 MAP2K6P52564 334 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 IST1P53990 364 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 CDH12P55289 794 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SPIBQ01892 262 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 COX10Q12887 443 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 DAG1Q14118 895 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 DCST1Q5T197 706 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SLC22A10Q63ZE4 541 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 DESI1Q6ICB0 168 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 WBP2NLQ6ICG8 309 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 ULK3Q6PHR2 472 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 TBPL2Q6SJ96 375 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 MARCH3Q86UD3 253 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 APLFQ8IW19 511 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 GALNT16Q8N428 558 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 TMEM156Q8N614 296 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 OR5W2Q8NH69 310 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 BRIX1Q8TDN6 353 aaKnown RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 GIPC3Q8TF64 312 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 DUSP19Q8WTR2 217 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 ACOT11Q8WXI4 607 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SLC38A4Q969I6 547 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SDCCAG3Q96C92 435 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 SLC41A3Q96GZ6 507 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-208ENST00000469529 PRSS27Q9BQR3 290 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 DGCR6LQ9BY27 220 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 RTN4RQ9BZR6 473 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 POLHQ9Y253 713 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 CCDC88CQ9P219 2028 aa11.65□□□□□ -0.54
TRAF4-208ENST00000469529 C7orf72A4D263 438 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 E9PQ18 207 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 PDLIM1O00151 329 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 DLGAP1O14490 977 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 RRP8O43159 456 aaKnown RBP11.64□□□□□ -0.55
TRAF4-208ENST00000469529 EFSO43281 561 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 FRS3O43559 492 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 MAN1A2O60476 641 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 CCNB2O95067 398 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-208ENST00000469529 GKN3PP0CG01 181 aa11.64□□□□□ -0.55
TRAF4-208ENST00000469529 WT1P19544 449 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms