RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 IER2Q9BTL4 223 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 CPNE5Q9HCH3 593 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 TREM1Q9NP99 234 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 POM121BA6NF01 834 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 HTR2BP41595 481 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 ZNF81P51508 661 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 SSR4P51571 173 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 VAMP2P63027 116 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 RAB39AQ14964 217 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 MMP21Q8N119 569 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 OR8K3Q8NH51 312 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 OLIG1Q8TAK6 271 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 NEURL3Q96EH8 262 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 CNIH4Q9P003 139 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 WNT16Q9UBV4 365 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 TBC1D29Q9UFV1 150 aa14.09□□□□□ -0.15
LIMS2-213ENST00000469300 GGT3PA6NGU5 568 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 RBBP9O75884 186 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 CD3GP09693 182 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 IL32P24001 234 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 UGT2B10P36537 528 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 CSNK1A1P48729 337 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 PIGFQ07326 219 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 SCGB2B2Q4G0G5 96 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 TMPRSS12Q86WS5 348 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 SAMD12Q8N8I0 201 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 ZNF615Q8N8J6 731 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 CREB3L1Q96BA8 519 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 LGALS12Q96DT0 336 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 OR10A5Q9H207 317 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 TRPV4Q9HBA0 871 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 IER3IP1Q9Y5U9 82 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 RNF215Q9Y6U7 377 aa14.08□□□□□ -0.15
LIMS2-213ENST00000469300 A6NLC8 198 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 UCHL1P09936 223 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 EXT1Q16394 746 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 CCBE1Q6UXH8 406 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 IQCF2Q8IXL9 164 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 FCAMRQ8WWV6 532 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 SAV1Q9H4B6 383 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 TEX10Q9NXF1 929 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 QPCTLQ9NXS2 382 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 ZNF831Q5JPB2 1677 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 ANXA3P12429 323 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 HOXB9P17482 250 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 TCN2P20062 427 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 OPRD1P41143 372 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 SLC19A1P41440 591 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 SPNS2Q8IVW8 549 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 LILRA3Q8N6C8 439 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 WDR20Q8TBZ3 569 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 ARL5BQ96KC2 179 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 IP6K3Q96PC2 410 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 FUZQ9BT04 418 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 TM7SF3Q9NS93 570 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 RPH3AQ9Y2J0 694 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 TEX13DA0A0J9YY54 714 aaPredicted RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 A0A1B0GVG6 124 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 A6NL46 340 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 LINC01565O15544 149 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 GKN3PP0CG01 181 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 BCL6P41182 706 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 C17orf67Q0P5P2 114 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 OR1Q1Q15612 314 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 KMT5CQ86Y97 462 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 CMIPQ8IY22 773 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 RNF175Q8N4F7 328 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 MAELQ96JY0 434 aaKnown RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 OR4K3Q96R72 315 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 WDR83Q9BRX9 315 aaKnown RBP14.08□□□□□ -0.16
LIMS2-213ENST00000469300 MRI1Q9BV20 369 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 C1QTNF3Q9BXJ4 246 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 WASH6PQ9NQA3 447 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 LY75O60449 1722 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 CDK5RAP2Q96SN8 1893 aa14.08□□□□□ -0.16
LIMS2-213ENST00000469300 FRS3O43559 492 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 CSN2P05814 226 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 EPHA4P54764 986 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 FAM71E1Q6IPT2 247 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 OR13C3Q8NGS6 347 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 SPRYD4Q8WW59 207 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 POTEKPQ9BYX7 375 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 INPP5EQ9NRR6 644 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 EXTL2Q9UBQ6 330 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 A8MV72 311 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 K7ESM1 405 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 HCRTR1O43613 425 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 CXCR4P61073 352 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 OR7A5Q15622 319 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 UGT8Q16880 541 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 GXYLT1Q4G148 440 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 ENTPD8Q5MY95 495 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 ZFP90Q8TF47 636 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 DNAJA3Q96EY1 480 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 AMDHD1Q96NU7 426 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 ELF4Q99607 663 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 PARPBPQ9NWS1 579 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms