RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CXorf36Q9H7Y0 433 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 COQ10BQ9H8M1 238 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ZCCHC3Q9NUD5 404 aaKnown RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ICAM5Q9UMF0 924 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 DNAJC15Q9Y5T4 150 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 SNX8Q9Y5X2 465 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 COL6A5A8TX70 2615 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 CR1P17927 2039 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 CHD3Q12873 2000 aaKnown RBP10.89□□□□□ -0.67
HDAC3-204ENST00000469207 ALPK2Q86TB3 2170 aa10.89□□□□□ -0.67
HDAC3-204ENST00000469207 A0A1W2PQD3 144 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 LSM1O15116 133 aaKnown RBP10.88□□□□□ -0.67
HDAC3-204ENST00000469207 TBX19O60806 448 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 LYZL6O75951 148 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 PRKD3O94806 890 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 CD8AP01732 235 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 CHRNGP07510 517 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 CD3EP07766 207 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 YES1P07947 543 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 LAMP1P11279 417 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 BCKDHAP12694 445 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 IL32P24001 234 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 ADH6P28332 368 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 IDUAP35475 653 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 SERPINB4P48594 390 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 UGT3A2Q3SY77 523 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 ZNF672Q499Z4 452 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-204ENST00000469207 KLHL26Q53HC5 615 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 LIPMQ5VYY2 423 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 HMBOX1Q6NT76 420 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 CDC73Q6P1J9 531 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 C4orf33Q8N1A6 199 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 BANPQ8N9N5 519 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 MNS1Q8NEH6 495 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 ZFP28Q8NHY6 868 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 GPR119Q8TDV5 335 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 HTRA1Q92743 480 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 GTPBP3Q969Y2 492 aaKnown RBP10.88□□□□□ -0.67
HDAC3-204ENST00000469207 DNAJA3Q96EY1 480 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 REXO5Q96IC2 774 aaKnown RBP10.88□□□□□ -0.67
HDAC3-204ENST00000469207 CCT7Q99832 543 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 BTBD2Q9BX70 525 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 HDHD5Q9BXW7 423 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 OR10A4Q9H209 315 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 FANCFQ9NPI8 374 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 YAE1D1Q9NRH1 226 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 ACSS1Q9NUB1 689 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-204ENST00000469207 KLHL13Q9P2N7 655 aa10.88□□□□□ -0.67
HDAC3-204ENST00000469207 CADP27708 2225 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 A0A1W2PP18 115 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 GTPBP1O00178 669 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 PRKCAP17252 672 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 CRHR1P34998 444 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 CCT5P48643 541 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 P2RX1P51575 399 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 C21orf58P58505 322 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 DMTNQ08495 405 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ITGADQ13349 1161 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 PCLAFQ15004 111 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 STK11Q15831 433 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 CCDC153Q494R4 210 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 HEPHL1Q6MZM0 1159 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ZCCHC12Q6PEW1 402 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 BHLHA15Q7RTS1 189 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 MISPQ8IVT2 679 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 DDIASQ8IXT1 998 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 IFT20Q8IY31 132 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ZNF614Q8N883 585 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 PIWIL2Q8TC59 973 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 HSD17B8Q92506 261 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 KISS1RQ969F8 398 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 CPNE4Q96A23 557 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 TRMT61AQ96FX7 289 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 METTL2AQ96IZ6 378 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ZNF300Q96RE9 604 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 PSD2Q9BQI7 771 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 TRIM2Q9C040 744 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 QRSL1Q9H0R6 528 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 PIGUQ9H490 435 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ESRP2Q9H6T0 727 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 CISD1Q9NZ45 108 aaKnown RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 NUP214P35658 2090 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ABCA1O95477 2261 aa10.87□□□□□ -0.67
HDAC3-204ENST00000469207 ATRQ13535 2644 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 ESPNB1AK53 854 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 PIP5K1BO14986 540 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 PEX11AO75192 247 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 C6orf47O95873 294 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 THBS1P07996 1170 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 PABPC4LP0CB38 370 aaKnown RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 KRT4P19013 534 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 CCT3P49368 545 aaKnown RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 TP53BP2Q13625 1128 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 RNPS1Q15287 305 aaKnown RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 DCST2Q5T1A1 773 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 KANK2Q63ZY3 851 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 DNM1P46Q6ZS02 220 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 CLEC4FQ8N1N0 589 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 KRTCAP2Q8N6L1 136 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms