RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PDX1P52945 283 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ERVK-25P63136 954 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 EIF4EBP2Q13542 120 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-203ENST00000467558 BAIAP2L2Q6UXY1 529 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 RASSF6Q6ZTQ3 369 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ANKRD13BQ86YJ7 626 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 PATE1Q8WXA2 126 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SLC46A1Q96NT5 459 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 CD93Q9NPY3 652 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 POLE3Q9NRF9 147 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 MED17Q9NVC6 651 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 HEMK1Q9Y5R4 338 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-203ENST00000467558 TRAV27A0A087WT01 109 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 POU2F2P09086 479 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 PRR35P0CG20 571 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 KIAA1211LQ6NV74 962 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SLC35F2Q8IXU6 374 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 OR14L1PQ8NHC6 308 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 FCAMRQ8WWV6 532 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 PITX2Q99697 317 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 FOLH1BQ9HBA9 442 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 DUSP22Q9NRW4 184 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SACM1LQ9NTJ5 587 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 C14orf119Q9NWQ9 140 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 PCDH10Q9P2E7 1040 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 FAM183AA6NL82 134 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 LCMT2O60294 686 aaKnown RBP12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ACP2P11117 423 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ELAVL4P26378 380 aaKnown RBP12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ZP2Q05996 745 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 DUSP7Q16829 419 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 GPR139Q6DWJ6 353 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 CCL4L1Q8NHW4 92 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 FNDC8Q8TC99 324 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 AMBRA1Q9C0C7 1298 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 OR51E2Q9H255 320 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 PMF1-BGLAPU3KQ54 211 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SERINC4A6NH21 518 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 INMT-MINDY4F8WBC2 141 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 RBBP9O75884 186 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 ETHE1O95571 254 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 UCHL1P09936 223 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 ITGB8P26012 769 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SOX3P41225 446 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 DAP3P51398 398 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 GLO1Q04760 184 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SCGB2B2Q4G0G5 96 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM69Q5SWH9 247 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SAXO2Q658L1 398 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 OPN5Q6U736 354 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 MBOAT2Q6ZWT7 520 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM151AQ8N4L1 468 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 PGAM5Q96HS1 289 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 INPP5EQ9NRR6 644 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 INIPQ9NRY2 104 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SLC39A1Q9NY26 324 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF639Q9UID6 485 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SCP2D1Q9UJQ7 156 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 WDR37Q9Y2I8 494 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 PCDHGA10Q9Y5H3 936 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 C2CD4DB7Z1M9 353 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 PLOD2O00469 737 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 GALR3O60755 368 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 RBMXL2O75526 392 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 TFPTP0C1Z6 253 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 SFTPDP35247 375 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 GNG2P59768 71 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 KLHDC8BQ8IXV7 354 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 LCORQ96JN0 433 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 CCDC32Q9BV29 185 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 EGLN3Q9H6Z9 239 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 FAM171A2A8MVW0 826 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 PGAM2P15259 253 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 CD40LGP29965 261 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 DCDP81605 110 aaKnown RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF385BQ569K4 471 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 EEF1A1P5Q5VTE0 462 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 KDM4DQ6B0I6 523 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 OR5W2Q8NH69 310 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 OR5AK2Q8NH90 309 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 BAHD1Q8TBE0 780 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF225Q9UK10 706 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 RGPD4Q7Z3J3 1758 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-203ENST00000467558 CPNE6O95741 557 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 BSGP35613 385 aa12.85□□□□□ -0.35
BRAT1-203ENST00000467558 MAP2K3P46734 347 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms